myRT

myRT report for GCA_900760545.1_SRS019267_9

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Seq: CAAEZL010000080.1 (6655 bp)
Overview 1 RT 1: 3360-5384 bp Neighborhood of RT #1 [3360, 5384] rpsL RVT-DGRs Avd_like Feature: gene Location: 3360-3782 bp Feature: domain Description: rpsL Location: 3372-3777 bp Feature: domain Description: rpsL Location: 3372-3777 bp Feature: gene Location: 4052-4201 bp Feature: gene Location: 4276-4797 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4489-4666 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4489-4666 bp Feature: gene Location: 4831-5139 bp Feature: domain Description: Avd_like Location: 4858-5131 bp Feature: domain Description: Avd_like Location: 4858-51 31 bp Feature: gene Location: 5220-5384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsL (PRK05163), RVT-DGRs, Avd_like (cd16376)

Seq: CAAEZL010000039.1 (3379 bp)
Overview 1 RT 1: 2-2923 bp Neighborhood of RT #1 [2, 3033] RVT-GII RVT-GII GIIM COG5421 Feature: gene Location: 2-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-311 bp Feature: gene Location: 331-1002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-541 bp Feature: domain Description: GIIM Note: maturase Location: 604-829 bp Feature: domain Description: GIIM Note: maturase Location: 604-82 9 bp Feature: gene Location: 1300-3033 bp Feature: domain Description: COG5421 Location: 1885-2923 bp Feature: domain Description: COG542 1 Location: 1885-2 92 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG5421 (Transposase )

Seq: CAAEZL010000210.1 (5261 bp)
Overview 1 RT 1: 3555-5254 bp Neighborhood of RT #1 [3555, 5259] Adenine_glyco RVT-GII Feature: gene Location: 3555-4100 bp Feature: domain Description: Adenine_glyco Location: 3576-4086 bp Feature: domain Description: Adenine_glyco Location: 3 576-4086 bp Feature: gene Location: 4162-4452 bp Feature: gene Location: 4858-5259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5089-5254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5089-5254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Adenine_glyco (pfam03352), RVT-GII

Seq: CAAEZL010000173.1 (7580 bp)
Overview 1 RT 1: 1469-5156 bp Neighborhood of RT #1 [1469, 5191] Avd_like RVT-DGRs RVT-DGRs frr pheS Feature: gene Location: 1469-1807 bp Feature: gene Location: 1824-2156 bp Feature: domain Description: Avd_like Location: 1830-2127 bp Feature: domain Description: Avd_like Location: 1830-2127 bp Feature: gene Location: 2137-2523 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2344-2494 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 234 4 -24 94 bp Feature: gene Location: 2640-3242 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2709-3051 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2709-3051 bp Feature: gene Location: 3297-3842 bp Feature: domain Description: frr Location: 3300-3840 bp Feature: domain Description: frr Location: 3300-384 0 bp Feature: gene Location: 4142-5191 bp Feature: domain Description: pheS Location: 4148-5156 bp Feature: domain Description: pheS Location: 4 14 8-5156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, frr (TIGR00496), pheS (TIGR00468)