myRT

myRT report for GCA_900761335.1_SRS056273_16

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Seq: CAAFCI010000422.1 (36615 bp)
Overview 1 RT 1: 2-4277 bp Neighborhood of RT #1 [2, 4336] OMP_b-brl RVT-GII OMP_b-brl_2 Feature: gene Location: 2-652 bp Feature: gene Location: 972-1520 bp Feature: domain Description: OMP_b-brl Location: 1023-1518 bp Feature: domain Description: OMP_b-brl Location: 1 023-1 51 8 bp Feature: gene Location: 2009-2971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2345-2960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2345-2960 bp Feature: gene Location: 3141-3413 bp Feature: gene Location: 3638-4336 bp Feature: domain Description: OMP_b-brl_2 Location: 3707-4277 bp Feature: domain Description: OMP_b-brl_2 Location: 3707-4277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFCI010000490.1 (1352 bp)
Overview 1 RT 1: 3-1233 bp Neighborhood of RT #1 [3, 1301] RVT-GII GIIM Feature: gene Location: 3-1301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-936 bp Feature: domain Description: GIIM Note: maturase Location: 1017-1233 bp Feature: domain Description: GIIM Note: maturase Location: 1017-12 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFCI010000487.1 (10634 bp)
Overview 1 RT 1: 3-3036 bp Neighborhood of RT #1 [3, 3036] BACON RVT-GII GIIM RVT-GII Feature: gene Location: 3-416 bp Feature: domain Description: BACON Location: 126-405 bp Feature: domain Description: BACON Location: 126-405 bp Feature: gene Location: 425-631 bp Feature: gene Location: 950-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971-1373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971-13 73 bp Feature: domain Description: GIIM Note: maturase Location: 1385-1616 bp Feature: domain Description: GIIM Note: maturase Location: 13 85-1616 bp Feature: gene Location: 1816-2304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2152-2290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2152-2290 bp Feature: gene Location: 2594-2839 bp Feature: gene Location: 2908-3036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFCI010000075.1 (11789 bp)
Overview 1 RT 1: 667-7308 bp Neighborhood of RT #1 [667, 7364] REC RVT-Retrons Phage_int_SAM_5 INTN1_C_like NGN_SP_UpxY KOW_NusG Feature: gene Location: 667-2358 bp Feature: domain Description: REC Location: 1474-1705 bp Feature: domain Description: REC Location: 14 74 -1705 bp Feature: gene Location: 2367-3011 bp Feature: gene Location: 2989-5208 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3190-3775 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3190-3775 bp Feature: gene Location: 5479-6450 bp Feature: domain Description: Phage_int_SAM_5 Location: 5518-5761 bp Feature: domain Description: Phage_int_SAM_5 Location: 5518-5761 bp Feature: domain Description: INTN1_C_like Location: 5845-6364 bp Feature: domain Description: INTN1_C_like Location: 584 5-6364 bp Feature: gene Location: 6786-7364 bp Feature: domain Description: NGN_SP_UpxY Location: 6864-7146 bp Feature: domain Description: NGN_SP_UpxY Location: 6864 -714 6 bp Feature: domain Description: KOW_NusG Location: 7197-7308 bp Feature: domain Description: KOW_NusG Location: 7197-7308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFCI010000105.1 (25653 bp)
Overview 1 RT 1: 20385-24234 bp Neighborhood of RT #1 [20385, 24234] INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII Feature: gene Location: 20385-21149 bp Feature: domain Description: INT_RitB_C_like Location: 20466-21069 bp Feature: domain Description: INT_RitB_C_like Location: 20466-21069 bp Feature: gene Location: 21133-22059 bp Feature: domain Description: Phage_int_SAM_1 Location: 21178-21424 bp Feature: domain Description: Phage_int_SAM_1 Location: 21178-21424 bp Feature: domain Description: INT_RitC_C_like Location: 21514-22057 bp Feature: domain Description: INT_RitC_C_like Location: 215 14-2205 7 bp Feature: gene Location: 22138-22869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22384-22771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22384-22771 bp Feature: gene Location: 23467-23922 bp Feature: gene Location: 24067-24234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFCI010000491.1 (1320 bp)
Overview 1 RT 1: 1-1210 bp Neighborhood of RT #1 [1, 1269] RVT-GII GIIM Feature: gene Location: 1-1269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271-904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271-904 bp Feature: domain Description: GIIM Note: maturase Location: 985-1210 bp Feature: domain Description: GIIM Note: maturase Location: 985-1210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFCI010000163.1 (111693 bp)
Overview 1 RT 1: 58813-63322 bp Neighborhood of RT #1 [58813, 63327] HptA MFS_DtpA_like RVT-Retrons COG1237 Feature: gene Location: 58813-59349 bp Feature: domain Description: HptA Location: 58831-59341 bp Feature: domain Description: HptA Location: 58831-59341 bp Feature: gene Location: 59389-60927 bp Feature: domain Description: MFS_DtpA_like Location: 59410-60898 bp Feature: domain Description: MFS_DtpA_like Location: 59410-60898 bp Feature: gene Location: 61199-62320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61511-62063 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61511-62063 bp Feature: gene Location: 62857-63093 bp Feature: gene Location: 63196-63327 bp Feature: domain Description: COG1237 Location: 63217-63322 bp Feature: domain Description: COG1237 Location: 63217 -63322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT