myRT

myRT report for GCA_900762515.1_SRS144506_36

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Seq: CAAFHA010000034.1 (7927 bp)
Overview 1 RT 1: 160-6593 bp Neighborhood of RT #1 [160, 6715] dnaG RVT-UG24 HipA_C Feature: gene Location: 160-1200 bp Feature: domain Description: dnaG Location: 244-1186 bp Feature: domain Description: dnaG Location: 244-1 1 86 bp Feature: gene Location: 1206-1883 bp Feature: gene Location: 1904-5329 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 2417-2882 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 241 7-2882 bp Feature: gene Location: 5464-5739 bp Feature: gene Location: 5816-6715 bp Feature: domain Description: HipA_C Location: 5927-6593 bp Feature: domain Description: HipA_C Location: 5927-6593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT-UG24, HipA_C (pfam07804)

Seq: CAAFHA010000118.1 (7172 bp)
Overview 1 RT 1: 1-5723 bp Neighborhood of RT #1 [1, 5723] ParB_N_like YbjD YbjD RVT-Retrons XerD Feature: gene Location: 1-876 bp Feature: domain Description: ParB_N_like Location: 601-856 bp Feature: domain Description: ParB_N_like Location: 601-856 bp Feature: gene Location: 1076-3106 bp Feature: domain Description: YbjD Location: 1079-1292 bp Feature: domain Description: YbjD Location: 1079-12 92 bp Feature: domain Description: YbjD Location: 1823-2423 bp Feature: domain Description: YbjD Location: 182 3-2 42 3 bp Feature: gene Location: 3326-4342 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3431-3998 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3431-3998 bp Feature: gene Location: 4469-5575 bp Feature: domain Description: XerD Location: 4658-5435 bp Feature: domain Description: XerD Location: 4658-5435 bp Feature: gene Location: 5496-5723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_like (cd16411), YbjD (COG3593), RVT-Retrons, XerD (COG4974)

Seq: CAAFHA010000242.1 (2363 bp)
Overview 1 RT 1: 144-2362 bp Neighborhood of RT #1 [144, 2362] RVT-Retrons Feature: gene Location: 144-431 bp Feature: gene Location: 548-1531 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 692-1304 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 692-13 04 bp Feature: gene Location: 1556-1927 bp Feature: gene Location: 2150-2362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: CAAFHA010000182.1 (2253 bp)
Overview 1 RT 1: 1-2015 bp Neighborhood of RT #1 [1, 2224] HAD_5NT RVT-GII GIIM Feature: gene Location: 1-183 bp Feature: domain Description: HAD_5NT Location: 4-166 bp Feature: domain Description: HAD_5NT Location: 4 -166 bp Feature: gene Location: 196-342 bp Feature: gene Location: 905-2224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109-1724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109-1724 bp Feature: domain Description: GIIM Note: maturase Location: 1784-2015 bp Feature: domain Description: GIIM Note: maturase Location: 1784 -2015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_5NT (cd07504), RVT-GII, GIIM (pfam08388)