myRT

myRT report for GCA_900764305.1_SRS1719097_1

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Seq: CAAFNQ010000003.1 (2714 bp)
Overview 1 RT 1: 463-2712 bp Neighborhood of RT #1 [463, 2712] RVT_N RVT-GII GIIM Feature: gene Location: 463-591 bp Feature: gene Location: 762-2414 bp Feature: domain Description: RVT_N Location: 816-1059 bp Feature: domain Description: RVT_N Location: 81 6-1 059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1104-1752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 04-1 752 bp Feature: domain Description: GIIM Note: maturase Location: 1806-2037 bp Feature: domain Description: GIIM Note: maturase Location: 1 806-2037 bp Feature: gene Location: 2419-2712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNQ010000023.1 (123021 bp)
Overview 1 RT 1: 96514-102981 bp Neighborhood of RT #1 [96514, 102986] aconitase_mito TIGR00376 TIGR00376 RVT-GII GIIM Hc1 Feature: gene Location: 96514-98769 bp Feature: domain Description: aconitase_mito Location: 96562-98752 bp Feature: domain Description: aconitase_mito Location: 96562 -98752 bp Feature: gene Location: 98824-100776 bp Feature: domain Description: TIGR00376 Location: 98953-99829 bp Feature: domain Description: TIGR00376 Location: 98953-9982 9 bp Feature: domain Description: TIGR00376 Location: 99886-100768 bp Feature: domain Description: TIGR00376 Location: 99886-100768 bp Feature: gene Location: 100871-102232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101111-101726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101111-10172 6 bp Feature: domain Description: GIIM Note: maturase Location: 101783-101981 bp Feature: domain Description: GIIM Note: maturase Location: 101783-101981 bp Feature: gene Location: 102235-102366 bp Feature: gene Location: 102810-102986 bp Feature: domain Description: Hc1 Location: 102816-102981 bp Feature: domain Description: Hc1 Location: 102 816-102 981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNQ010000049.1 (54231 bp)
Overview 1 RT 1: 36773-42990 bp Neighborhood of RT #1 [36773, 43091] LacZ Glyco_hydro2_C5 F5_F8_type_C RVT-GII GIIM AcrR Feature: gene Location: 36773-37021 bp Feature: gene Location: 37331-39937 bp Feature: domain Description: LacZ Location: 37589-38963 bp Feature: domain Description: LacZ Location: 3 7589-3 8963 bp Feature: domain Description: Glyco_hydro2_C5 Location: 39143-39431 bp Feature: domain Description: Glyco_hydro2_C5 Location: 3 9143 -3 943 1 bp Feature: domain Description: F5_F8_type_C Location: 39569-39878 bp Feature: domain Description: F5_F8_type_C Location: 3 9569-3 9878 bp Feature: gene Location: 40518-41786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40731-41388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4073 1-413 88 bp Feature: domain Description: GIIM Note: maturase Location: 41469-41676 bp Feature: domain Description: GIIM Note: maturase Location: 41469-41676 bp Feature: gene Location: 41775-42041 bp Feature: gene Location: 42102-43091 bp Feature: domain Description: AcrR Location: 42504-42990 bp Feature: domain Description: AcrR Location: 42504-42990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNQ010000042.1 (149035 bp)
Overview 1 RT 1: 14476-27007 bp Neighborhood of RT #1 [14476, 27132] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 14476-15279 bp Feature: gene Location: 15692-17881 bp Feature: gene Location: 18086-19204 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18398-18950 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18398-18950 bp Feature: gene Location: 19205-25159 bp Feature: domain Description: DUF4011 Location: 20366-20879 bp Feature: domain Description: DUF4 011 Location: 20366-20879 bp Feature: domain Description: DEXXQc_SF1 Location: 21227-21869 bp Feature: domain Description: DEXXQc_SF1 Location: 21227-21869 bp Feature: domain Description: DEXXQc_SF1 Location: 22658-23414 bp Feature: domain Description: DEXXQc_SF1 Location: 22658-234 14 bp Feature: domain Description: TIGR00376 Location: 23543-23933 bp Feature: domain Description: TIGR00376 Location: 2354 3-23933 bp Feature: domain Description: MTES_1575 Location: 24086-24368 bp Feature: domain Description: MTES_1575 Location: 24 086-24 368 bp Feature: domain Description: DUF3320 Location: 24668-24797 bp Feature: domain Description: DUF3320 Location: 24 668-24 797 bp Feature: gene Location: 25327-27132 bp Feature: domain Description: rpsA Location: 25393-27007 bp Feature: domain Description: rpsA Location: 25393-27007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNQ010000026.1 (3967 bp)
Overview 1 RT 1: 1-3815 bp Neighborhood of RT #1 [1, 3838] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF3876 Feature: gene Location: 1-837 bp Feature: domain Description: Bac_Flav_CT_G Location: 4-829 bp Feature: domain Description: Bac_Flav_CT_G Location: 4-829 bp Feature: gene Location: 1406-3229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1670-2492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1670-2492 bp Feature: domain Description: Intron_maturas2 Location: 2666-2906 bp Feature: domain Description: Intron_maturas2 Location: 2666-2906 bp Feature: domain Description: HNHc Note: nucleases Location: 3020-3191 bp Feature: domain Description: HNHc Note: nucleases Location: 3020-3191 bp Feature: gene Location: 3482-3838 bp Feature: domain Description: DUF3876 Location: 3545-3815 bp Feature: domain Description: DUF3876 Location: 35 45 -3815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNQ010000032.1 (28745 bp)
Overview 1 RT 1: 82-3721 bp Neighborhood of RT #1 [82, 3723] RVT_N RVT-GII GIIM rSAM_HydG Feature: gene Location: 82-1752 bp Feature: domain Description: RVT_N Location: 307-550 bp Feature: domain Description: RVT_N Location: 307-550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 595-1243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 595-1243 bp Feature: domain Description: GIIM Note: maturase Location: 1294-1528 bp Feature: domain Description: GIIM Note: maturase Location: 1294-1528 bp Feature: gene Location: 1796-2014 bp Feature: gene Location: 2302-3723 bp Feature: domain Description: rSAM_HydG Location: 2311-3721 bp Feature: domain Description: rSAM_HydG Location: 2311-3721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT