myRT

myRT report for GCA_900764315.1_SRS1596873_47

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Seq: CAAFNN010000014.1 (1178 bp)
Overview 1 RT 1: 362-1004 bp Neighborhood of RT #1 [362, 1177] RVT-GII GIIM Feature: gene Location: 362-1177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 -725 bp Feature: domain Description: GIIM Note: maturase Location: 782-1004 bp Feature: domain Description: GIIM Note: maturase Location: 782-1 004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAAFNN010000020.1 (1493 bp)
Overview 1 RT 1: 1-1490 bp Neighborhood of RT #1 [1, 1490] RVT-GII GIIM Feature: gene Location: 1-1194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121-736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 1-736 bp Feature: domain Description: GIIM Note: maturase Location: 796-1015 bp Feature: domain Description: GIIM Note: maturase Location: 796-1015 bp Feature: gene Location: 1353-1490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAAFNN010000295.1 (3115 bp)
Overview 1 RT 1: 802-2999 bp Neighborhood of RT #1 [802, 3112] RVT-GII SpaA Feature: gene Location: 802-2607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1060-1777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1060-1777 bp Feature: gene Location: 2714-3112 bp Feature: domain Description: SpaA Location: 2756-2999 bp Feature: domain Description: SpaA Location: 2756-2999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SpaA (pfam17802)

Seq: CAAFNN010000470.1 (2703 bp)
Overview 1 RT 1: 745-1744 bp Neighborhood of RT #1 [745, 2571] RVT-GII Feature: gene Location: 745-2571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 5-174 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAFNN010000271.1 (15551 bp)
Overview 1 RT 1: 3838-10041 bp Neighborhood of RT #1 [3838, 11726] Phage_int_SAM_5 INTN1_C_like RVT-AbiP2 Peptidase_C10 Metallophos AAA_14 Feature: gene Location: 3838-4623 bp Feature: domain Description: Phage_int_SAM_5 Location: 3847-4120 bp Feature: domain Description: Phage_int_SAM_5 Location: 3847-4120 bp Feature: domain Description: INTN1_C_like Location: 4189-4534 bp Feature: domain Description: INTN1_C_like Location: 4189-45 34 bp Feature: gene Location: 4744-5232 bp Feature: gene Location: 5255-6775 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5684-6140 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5 684-6140 bp Feature: gene Location: 6851-8611 bp Feature: domain Description: Peptidase_C10 Location: 6998-7565 bp Feature: domain Description: Peptidase_C10 Location: 6998-75 65 bp Feature: gene Location: 8634-11726 bp Feature: domain Description: Metallophos Location: 8643-9342 bp Feature: domain Description: Metallophos Location: 8643-9342 bp Feature: domain Description: AAA_14 Location: 9783-10041 bp Feature: domain Description: AAA_14 Location: 9783-10041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-AbiP2, Peptidase_C10 (pfam01640), Metallophos (pfam00149), AAA_14 (pfam13173)

Seq: CAAFNN010000487.1 (7105 bp)
Overview 1 RT 1: 2816-5879 bp Neighborhood of RT #1 [2816, 5879] Avd_like Fib_succ_major RVT-DGRs Feature: gene Location: 2816-3190 bp Feature: domain Description: Avd_like Location: 2843-3152 bp Feature: domain Description: Avd_like Location: 2843-3152 bp Feature: gene Location: 3418-3627 bp Feature: domain Description: Fib_succ_major Location: 3427-3607 bp Feature: domain Description: Fib_succ_major Location: 3427-36 07 bp Feature: gene Location: 3637-4896 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3847-4567 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3847-456 7 bp Feature: gene Location: 4978-5235 bp Feature: gene Location: 5358-5879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), Fib_succ_major (TIGR02145), RVT-DGRs

Seq: CAAFNN010000206.1 (20700 bp)
Overview 1 RT 1: 6537-18780 bp Neighborhood of RT #1 [6537, 18782] DEXXQc_Upf1-like DEXXQc_Upf1-like KOG1805 PIN_VapC_PhoHL-ATPase LabA_like_C RVT-AbiP2 NGN_SP_UpxY RfaH RNase_H_bacteria_like Feature: gene Location: 6537-8729 bp Feature: domain Description: DEXXQc_Upf1-like Location: 7143-7323 bp Feature: domain Description: DEXXQc_Upf1-like Location: 7 143-7 323 bp Feature: domain Description: DEXXQc_Upf1-like Location: 7419-7590 bp Feature: domain Description: DEXXQc_Upf1-like Location: 7 419-7 590 bp Feature: domain Description: KOG1805 Location: 7863-8169 bp Feature: domain Description: KOG1805 Location: 7 863-8169 bp Feature: domain Description: PIN_VapC_PhoHL-ATPase Location: 8340-8709 bp Feature: domain Description: PIN_VapC_PhoHL-ATPase Location: 8340-87 09 bp Feature: gene Location: 8743-15507 bp Feature: domain Description: LabA_like_C Location: 8824-8971 bp Feature: domain Description: LabA_like_C Location: 8824-897 1 bp Feature: gene Location: 15526-17148 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15964-16423 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15964-16423 bp Feature: gene Location: 17164-17892 bp Feature: domain Description: NGN_SP_UpxY Location: 17335-17668 bp Feature: domain Description: NGN_SP_UpxY Location: 17 335-17 668 bp Feature: domain Description: RfaH Location: 17680-17818 bp Feature: domain Description: RfaH Location: 17 680-17 818 bp Feature: gene Location: 18312-18782 bp Feature: domain Description: RNase_H_bacteria_like Location: 18390-18780 bp Feature: domain Description: RNase_H_bacteria_like Location: 18390-187 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXXQc_Upf1-like (cd17934), KOG1805 (KOG1805, DNA replication helicase ), PIN_VapC_PhoHL-ATPase (cd09883), LabA_like_C (cl14879), RVT-AbiP2, NGN_SP_UpxY (cd09895), RfaH (TIGR01955), RNase_H_bacteria_like (cd13935)