myRT

myRT report for GCA_900764335.1_SRS1719522_10

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Seq: CAAFNO010000160.1 (116870 bp)
Overview 1 RT 1: 42207-45371 bp Neighborhood of RT #1 [42207, 45400] RVT-DGRs HTH_XRE Gp49 Feature: gene Location: 42207-42443 bp Feature: gene Location: 42450-42932 bp Feature: gene Location: 43001-44491 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43394-43991 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43394-43991 bp Feature: gene Location: 44740-45051 bp Feature: domain Description: HTH_XRE Location: 44854-45010 bp Feature: domain Description: HTH_XRE Location: 44854-4501 0 bp Feature: gene Location: 45056-45400 bp Feature: domain Description: Gp49 Location: 45110-45371 bp Feature: domain Description: Gp49 Location: 451 1 0-45371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000101.1 (2497 bp)
Overview 1 RT 1: 212-2041 bp Neighborhood of RT #1 [212, 2382] RVT-GII Intron_maturas2 Feature: gene Location: 212-340 bp Feature: gene Location: 574-2382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838-1660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838-1660 bp Feature: domain Description: Intron_maturas2 Location: 1786-2041 bp Feature: domain Description: Intron_maturas2 Location: 1786-2 041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000098.1 (15177 bp)
Overview 1 RT 1: 2873-11499 bp Neighborhood of RT #1 [2873, 12704] N6_Mtase COG4646 RVT_N RVT-GII GIIM KAP_NTPase Feature: gene Location: 2873-3127 bp Feature: gene Location: 3131-7168 bp Feature: domain Description: N6_Mtase Location: 3623-4046 bp Feature: domain Description: N6_Mtase Location: 3 623 -4046 bp Feature: domain Description: COG4646 Location: 4820-6551 bp Feature: domain Description: COG4646 Location: 4820-6551 bp Feature: gene Location: 7819-9495 bp Feature: domain Description: RVT_N Location: 7879-8122 bp Feature: domain Description: RVT_N Location: 7879-8122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8167-8815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8167-8815 bp Feature: domain Description: GIIM Note: maturase Location: 8869-9100 bp Feature: domain Description: GIIM Note: maturase Location: 8869-9100 bp Feature: gene Location: 9497-10576 bp Feature: gene Location: 10815-12704 bp Feature: domain Description: KAP_NTPase Location: 10863-11499 bp Feature: domain Description: KAP_NTPase Location: 10863 -11499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000249.1 (56264 bp)
Overview 1 RT 1: 24650-35879 bp Neighborhood of RT #1 [24650, 35879] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 24650-25555 bp Feature: domain Description: rpsA Location: 24716-25544 bp Feature: domain Description: rpsA Location: 24 716-2554 4 bp Feature: gene Location: 25652-31609 bp Feature: domain Description: DUF4011 Location: 26882-27395 bp Feature: domain Description: DUF4 011 Location: 26882-27395 bp Feature: domain Description: DEXXQc_SF1 Location: 27734-28442 bp Feature: domain Description: DEXXQc_SF1 Location: 27734 -284 4 2 bp Feature: domain Description: DEXXQc_SF1 Location: 29162-29921 bp Feature: domain Description: DEXXQc_SF1 Location: 29162-29921 bp Feature: domain Description: TIGR00376 Location: 30050-30440 bp Feature: domain Description: TIGR00376 Location: 30050-304 4 0 bp Feature: domain Description: MTES_1575 Location: 30593-30878 bp Feature: domain Description: MTES_1575 Location: 30593-30878 bp Feature: domain Description: DUF3320 Location: 31118-31259 bp Feature: domain Description: DUF3320 Location: 31118-31259 bp Feature: gene Location: 31611-32741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31932-32475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31932-324 75 bp Feature: gene Location: 32946-35135 bp Feature: gene Location: 35724-35879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000080.1 (15683 bp)
Overview 1 RT 1: 246-2825 bp Neighborhood of RT #1 [246, 2825] Avd_like RVT-DGRs Feature: gene Location: 246-653 bp Feature: domain Description: Avd_like Location: 279-588 bp Feature: domain Description: Avd_like Location: 279-5 88 bp Feature: gene Location: 668-2089 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1043-1745 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1043-1745 bp Feature: gene Location: 2052-2330 bp Feature: gene Location: 2529-2825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000125.1 (1619 bp)
Overview 1 RT 1: 3-1465 bp Neighborhood of RT #1 [3, 1465] RVT-GII Feature: gene Location: 3-1130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-948 bp Feature: gene Location: 1220-1465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000146.1 (2506 bp)
Overview 1 RT 1: 119-2449 bp Neighborhood of RT #1 [119, 2449] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 119-1930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1205 bp Feature: domain Description: Intron_maturas2 Location: 1280-1595 bp Feature: domain Description: Intron_maturas2 Location: 1280-1595 bp Feature: domain Description: HNHc Note: nucleases Location: 1751-1901 bp Feature: domain Description: HNHc Note: nucleases Location: 17 51-1901 bp Feature: gene Location: 2276-2449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000126.1 (2968 bp)
Overview 1 RT 1: 1-2956 bp Neighborhood of RT #1 [1, 2967] RVT-GII GIIM PRK05218 Feature: gene Location: 1-141 bp Feature: gene Location: 334-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625-1258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625-1258 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1564 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1564 bp Feature: gene Location: 1715-1909 bp Feature: gene Location: 2428-2967 bp Feature: domain Description: PRK05218 Location: 2434-2956 bp Feature: domain Description: PRK05218 Location: 2434-2956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000134.1 (2676 bp)
Overview 1 RT 1: 90-2447 bp Neighborhood of RT #1 [90, 2447] RVT-GII GIIM Feature: gene Location: 90-1373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300-915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300-9 15 bp Feature: domain Description: GIIM Note: maturase Location: 975-1185 bp Feature: domain Description: GIIM Note: maturase Location: 9 75-1185 bp Feature: gene Location: 1917-2447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000122.1 (124035 bp)
Overview 1 RT 1: 120670-123329 bp Neighborhood of RT #1 [120670, 123478] RVT_N RVT-GII GIIM Feature: gene Location: 120670-121134 bp Feature: gene Location: 121155-121808 bp Feature: gene Location: 122039-123478 bp Feature: domain Description: RVT_N Location: 122108-122351 bp Feature: domain Description: RVT_N Location: 12210 8-122351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122396-123041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122396-123041 bp Feature: domain Description: GIIM Note: maturase Location: 123095-123329 bp Feature: domain Description: GIIM Note: maturase Location: 123095-123329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFNO010000178.1 (3016 bp)
Overview 1 RT 1: 2-3000 bp Neighborhood of RT #1 [2, 3000] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-310 bp Feature: gene Location: 420-2216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693-1503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693-1503 bp Feature: domain Description: Intron_maturas2 Location: 1590-1863 bp Feature: domain Description: Intron_maturas2 Location: 1590-1863 bp Feature: domain Description: HNHc Note: nucleases Location: 2043-2196 bp Feature: domain Description: HNHc Note: nucleases Location: 2043-2196 bp Feature: gene Location: 2343-2534 bp Feature: gene Location: 2740-3000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT