myRT

myRT report for GCA_900764555.1_SRS1735609_11

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Seq: CAAFOK010000099.1 (27962 bp)
Overview 1 RT 1: 10852-15904 bp Neighborhood of RT #1 [10852, 15966] DUF4988 RVT-GII DUF2582 Feature: gene Location: 10852-13941 bp Feature: domain Description: DUF4988 Location: 10933-11398 bp Feature: domain Description: DUF4988 Location: 1 0933-1 1 398 bp Feature: gene Location: 14394-14678 bp Feature: gene Location: 14691-14939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14781-14934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4781 -1 4934 bp Feature: gene Location: 15169-15315 bp Feature: gene Location: 15721-15966 bp Feature: domain Description: DUF2582 Location: 15724-15904 bp Feature: domain Description: DUF2582 Location: 1 5724-1 5904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4988 (pfam16378), RVT-GII, DUF2582 (pfam10771)

Seq: CAAFOK010000537.1 (34867 bp)
Overview 1 RT 1: 24749-31790 bp Neighborhood of RT #1 [24749, 31834] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-UG24 dnaG Feature: gene Location: 24749-24949 bp Feature: gene Location: 24971-26176 bp Feature: domain Description: Arm-DNA-bind_5 Location: 25004-25220 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2 5004-2 52 2 0 bp Feature: domain Description: Phage_int_SAM_5 Location: 25358-25592 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 5358-2 5592 bp Feature: domain Description: INTN1_C_like Location: 25658-26162 bp Feature: domain Description: INTN1_C_like Location: 2 5658-2 6162 bp Feature: gene Location: 26614-30051 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 27124-27589 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 2 712 4-2 7589 bp Feature: gene Location: 30053-30793 bp Feature: gene Location: 30800-31834 bp Feature: domain Description: dnaG Location: 30887-31790 bp Feature: domain Description: dnaG Location: 30887-31790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-UG24, dnaG (TIGR01391)

Seq: CAAFOK010000373.1 (74961 bp)
Overview 1 RT 1: 12594-15973 bp Neighborhood of RT #1 [12594, 15973] RVT-DGRs Feature: gene Location: 12594-13178 bp Feature: gene Location: 13126-13356 bp Feature: gene Location: 13322-14137 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13655-13979 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13 655-13 979 bp Feature: gene Location: 14421-14624 bp Feature: gene Location: 14654-15973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs