myRT

myRT report for GCA_900764575.1_SRS2320656_19

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Seq: CAAFOO010000727.1 (1165 bp)
Overview 1 RT 1: 3-1163 bp Neighborhood of RT #1 [3, 1163] RVT-GII Feature: gene Location: 3-518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 -51 6 bp Feature: gene Location: 870-1163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAFOO010000796.1 (1856 bp)
Overview 1 RT 1: 83-1490 bp Neighborhood of RT #1 [83, 1490] RVT-GII GIIM Feature: gene Location: 83-1348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 75-890 bp Feature: domain Description: GIIM Note: maturase Location: 953-1178 bp Feature: domain Description: GIIM Note: maturase Location: 953-1178 bp Feature: gene Location: 1353-1490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAAFOO010000050.1 (3921 bp)
Overview 1 RT 1: 71-3240 bp Neighborhood of RT #1 [71, 3293] XerC RVT-DGRs Avd_like Feature: gene Location: 71-1252 bp Feature: domain Description: XerC Location: 437-1229 bp Feature: domain Description: XerC Location: 43 7-1229 bp Feature: gene Location: 1430-2629 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1613-2306 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1613 -23 06 bp Feature: gene Location: 2635-2826 bp Feature: gene Location: 2886-3293 bp Feature: domain Description: Avd_like Location: 2922-3240 bp Feature: domain Description: Avd_like Location: 2922-3 240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-DGRs, Avd_like (cd16376)

Seq: CAAFOO010000287.1 (1509 bp)
Overview 1 RT 1: 51-1399 bp Neighborhood of RT #1 [51, 1491] RVT-GII GIIM Feature: gene Location: 51-179 bp Feature: gene Location: 229-1491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 33-1090 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1399 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAAFOO010000793.1 (1409 bp)
Overview 1 RT 1: 2-1335 bp Neighborhood of RT #1 [2, 1355] COG4646 RVT-GII Feature: gene Location: 2-463 bp Feature: domain Description: COG4646 Location: 77-452 bp Feature: domain Description: COG4646 Location: 77-45 2 bp Feature: gene Location: 554-832 bp Feature: gene Location: 1023-1355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII

Seq: CAAFOO010000795.1 (3797 bp)
Overview 1 RT 1: 91-2837 bp Neighborhood of RT #1 [91, 3187] TraO Bac_Flav_CT_N RVT-GII Intron_maturas2 Feature: gene Location: 91-672 bp Feature: domain Description: TraO Location: 166-667 bp Feature: domain Description: TraO Location: 16 6 -6 6 7 bp Feature: gene Location: 676-1386 bp Feature: domain Description: Bac_Flav_CT_N Location: 805-1363 bp Feature: domain Description: Bac_Flav_CT_N Location: 805-136 3 bp Feature: gene Location: 1376-3187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1640-2462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 40-246 2 bp Feature: domain Description: Intron_maturas2 Location: 2540-2837 bp Feature: domain Description: Intron_maturas2 Location: 2540-2837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraO (pfam10626), Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348)