myRT

myRT report for GCA_900765455.1_SRS294922_3

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Seq: CAAFRN010001092.1 (1524 bp)
Overview 1 RT 1: 2-1493 bp Neighborhood of RT #1 [2, 1522] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-178 bp Feature: gene Location: 254-1522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-785 bp Feature: domain Description: Intron_maturas2 Location: 857-1172 bp Feature: domain Description: Intron_maturas2 Location: 857-1 1 72 bp Feature: domain Description: HNHc Note: nucleases Location: 1319-1493 bp Feature: domain Description: HNHc Note: nucleases Location: 1 31 9-1 493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAAFRN010000062.1 (2472 bp)
Overview 1 RT 1: 190-2127 bp Neighborhood of RT #1 [190, 2127] RVT_N RVT-GII GIIM Feature: gene Location: 190-1899 bp Feature: domain Description: RVT_N Location: 250-493 bp Feature: domain Description: RVT_N Location: 2 50-493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1186 bp Feature: domain Description: GIIM Note: maturase Location: 1243-1474 bp Feature: domain Description: GIIM Note: maturase Location: 12 43-1474 bp Feature: gene Location: 1942-2127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAAFRN010000817.1 (2807 bp)
Overview 1 RT 1: 93-2718 bp Neighborhood of RT #1 [93, 2718] RVT-GII HNHc Feature: gene Location: 93-2066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1167 bp Feature: domain Description: HNHc Note: nucleases Location: 1722-1860 bp Feature: domain Description: HNHc Note: nucleases Location: 1722-1860 bp Feature: gene Location: 2419-2718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: CAAFRN010000831.1 (2383 bp)
Overview 1 RT 1: 203-1883 bp Neighborhood of RT #1 [203, 2269] RVT_N RVT-GII GIIM Feature: gene Location: 203-352 bp Feature: gene Location: 560-2269 bp Feature: domain Description: RVT_N Location: 662-905 bp Feature: domain Description: RVT_N Location: 662-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1598 bp Feature: domain Description: GIIM Note: maturase Location: 1652-1883 bp Feature: domain Description: GIIM Note: maturase Location: 1652-1883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAAFRN010000688.1 (2051 bp)
Overview 1 RT 1: 695-1808 bp Neighborhood of RT #1 [695, 1972] RVT-GII GIIM Feature: gene Location: 695-1972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 908-1523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 908-15 23 bp Feature: domain Description: GIIM Note: maturase Location: 1589-1808 bp Feature: domain Description: GIIM Note: maturase Location: 15 89-1808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAAFRN010000295.1 (1420 bp)
Overview 1 RT 1: 2-1383 bp Neighborhood of RT #1 [2, 1418] RVT-UG2 Feature: gene Location: 2-160 bp Feature: gene Location: 400-612 bp Feature: gene Location: 786-1418 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 984-1383 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 984-1383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: CAAFRN010000901.1 (2484 bp)
Overview 1 RT 1: 222-2356 bp Neighborhood of RT #1 [222, 2382] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 222-551 bp Feature: gene Location: 565-2382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-1651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-1651 bp Feature: domain Description: Intron_maturas2 Location: 1726-2053 bp Feature: domain Description: Intron_maturas2 Location: 17 26-2053 bp Feature: domain Description: HNHc Note: nucleases Location: 2206-2356 bp Feature: domain Description: HNHc Note: nucleases Location: 2206-2356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAAFRN010001025.1 (3131 bp)
Overview 1 RT 1: 3-3130 bp Neighborhood of RT #1 [3, 3130] Relaxase RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3-299 bp Feature: domain Description: Relaxase Location: 72-297 bp Feature: domain Description: Relaxase Location: 72-297 bp Feature: gene Location: 347-628 bp Feature: gene Location: 615-2423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 79-1701 bp Feature: domain Description: Intron_maturas2 Location: 1797-2076 bp Feature: domain Description: Intron_maturas2 Location: 1797-2076 bp Feature: domain Description: HNHc Note: nucleases Location: 2253-2400 bp Feature: domain Description: HNHc Note: nucleases Location: 2253-2400 bp Feature: gene Location: 2705-2851 bp Feature: gene Location: 2951-3130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAAFRN010001280.1 (2083 bp)
Overview 1 RT 1: 3-2082 bp Neighborhood of RT #1 [3, 2082] RVT-Retrons RVT-Retrons Feature: gene Location: 3-245 bp Feature: gene Location: 250-729 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 262-502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 262-502 bp Feature: gene Location: 810-1232 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 954-1200 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9 54-1200 bp Feature: gene Location: 1257-1469 bp Feature: gene Location: 1852-2082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: CAAFRN010000528.1 (2495 bp)
Overview 1 RT 1: 55-2353 bp Neighborhood of RT #1 [55, 2376] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 55-252 bp Feature: gene Location: 550-2376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835-1657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835-1657 bp Feature: domain Description: Intron_maturas2 Location: 1729-2053 bp Feature: domain Description: Intron_maturas2 Location: 1729-2053 bp Feature: domain Description: HNHc Note: nucleases Location: 2206-2353 bp Feature: domain Description: HNHc Note: nucleases Location: 2206-2353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)