myRT

myRT report for GCA_900765585.1_SRS294878_8

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Seq: CAAFSD010000097.1 (38431 bp)
Overview 1 RT 1: 8666-11980 bp Neighborhood of RT #1 [8666, 12006] zf-CHC2 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 8666-8848 bp Feature: domain Description: zf-CHC2 Location: 8693-8834 bp Feature: domain Description: zf-CHC2 Location: 8693-8834 bp Feature: gene Location: 9090-9263 bp Feature: gene Location: 9393-11201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9657-10479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9657-1 0479 bp Feature: domain Description: Intron_maturas2 Location: 10575-10860 bp Feature: domain Description: Intron_maturas2 Location: 1 0575-1 0860 bp Feature: gene Location: 11191-11736 bp Feature: gene Location: 11740-12006 bp Feature: domain Description: Toprim_2 Location: 11743-11980 bp Feature: domain Description: Toprim_2 Location: 1 1 743-1 1 980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-CHC2 (pfam01807), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)

Seq: CAAFSD010000022.1 (70096 bp)
Overview 1 RT 1: 59648-64363 bp Neighborhood of RT #1 [59648, 64911] TraG-D_C RVT-GII Intron_maturas2 HNHc YWFCY Feature: gene Location: 59648-60184 bp Feature: gene Location: 60356-61813 bp Feature: domain Description: TraG-D_C Location: 61160-61493 bp Feature: domain Description: TraG-D_C Location: 61160-61493 bp Feature: gene Location: 61800-63632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62085-62904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 085-62 904 bp Feature: domain Description: Intron_maturas2 Location: 62979-63288 bp Feature: domain Description: Intron_maturas2 Location: 62 979-632 88 bp Feature: domain Description: HNHc Note: nucleases Location: 63462-63606 bp Feature: domain Description: HNHc Note: nucleases Location: 63462 -63606 bp Feature: gene Location: 63811-64059 bp Feature: gene Location: 64180-64911 bp Feature: domain Description: YWFCY Location: 64186-64363 bp Feature: domain Description: YWFCY Location: 64186-64363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), YWFCY (pfam14293)

Seq: CAAFSD010000056.1 (18315 bp)
Overview 1 RT 1: 9412-14056 bp Neighborhood of RT #1 [9412, 14056] Relaxase RVT-GII Intron_maturas2 HNHc Relaxase Feature: gene Location: 9412-10200 bp Feature: gene Location: 10197-10880 bp Feature: domain Description: Relaxase Location: 10212-10560 bp Feature: domain Description: Relaxase Location: 10212-10560 bp Feature: gene Location: 11004-12809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11268-12090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11268-12090 bp Feature: domain Description: Intron_maturas2 Location: 12168-12474 bp Feature: domain Description: Intron_maturas2 Location: 12168-12474 bp Feature: domain Description: HNHc Note: nucleases Location: 12636-12780 bp Feature: domain Description: HNHc Note: nucleases Location: 1263 6-12780 bp Feature: gene Location: 13362-13706 bp Feature: domain Description: Relaxase Location: 13386-13698 bp Feature: domain Description: Relaxase Location: 13 3 86-13 698 bp Feature: gene Location: 13706-14056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAAFSD010000098.1 (80304 bp)
Overview 1 RT 1: 49974-53907 bp Neighborhood of RT #1 [49974, 53907] RVT-UG27 Feature: gene Location: 49974-50621 bp Feature: gene Location: 50635-51303 bp Feature: gene Location: 51296-52558 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 51488-52124 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 514 88-52124 bp Feature: gene Location: 52881-53378 bp Feature: gene Location: 53428-53907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27