myRT

myRT report for GCA_900765795.1_SRS294984_19

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Seq: CAAFTB010000046.1 (6151 bp)
Overview 1 RT 1: 208-6134 bp Neighborhood of RT #1 [208, 6148] RVT-GII GIIM YtxK COG4646 Feature: gene Location: 208-2124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1 246 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1558 bp Feature: domain Description: GIIM Note: maturase Location: 1 354-1 558 bp Feature: gene Location: 2171-2344 bp Feature: gene Location: 2822-6148 bp Feature: domain Description: YtxK Location: 3371-4043 bp Feature: domain Description: YtxK Location: 3371 -4043 bp Feature: domain Description: COG4646 Location: 4115-6134 bp Feature: domain Description: COG4646 Location: 41 1 5-61 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: CAAFTB010000048.1 (2738 bp)
Overview 1 RT 1: 114-2505 bp Neighborhood of RT #1 [114, 2505] RVT-GII Feature: gene Location: 114-2000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432 -1137 bp Feature: gene Location: 2037-2204 bp Feature: gene Location: 2296-2505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAFTB010000095.1 (167367 bp)
Overview 1 RT 1: 15131-20735 bp Neighborhood of RT #1 [15131, 20758] dnaE RVT-GII KOG4768 HNHc dnaE Feature: gene Location: 15131-17161 bp Feature: domain Description: dnaE Location: 15134-17144 bp Feature: domain Description: dnaE Location: 1513 4-17144 bp Feature: gene Location: 17813-17941 bp Feature: gene Location: 18016-18444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18025-18220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18025-18220 bp Feature: domain Description: KOG4768 Location: 18373-18433 bp Feature: domain Description: KOG4768 Location: 183 73 -1843 3 bp Feature: gene Location: 18475-19065 bp Feature: domain Description: HNHc Note: nucleases Location: 18844-18949 bp Feature: domain Description: HNHc Note: nucleases Location: 18844-18949 bp Feature: gene Location: 19313-20758 bp Feature: domain Description: dnaE Location: 19316-20735 bp Feature: domain Description: dnaE Location: 193 16-2073 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaE (PRK07374), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), HNHc (smart00507)

Seq: CAAFTB010000027.1 (14964 bp)
Overview 1 RT 1: 175-4619 bp Neighborhood of RT #1 [175, 4639] RVT-GII GIIM YdfG mycofact_OYE_2 Feature: gene Location: 175-351 bp Feature: gene Location: 428-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 686-1301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 686-1301 bp Feature: domain Description: GIIM Note: maturase Location: 1361-1580 bp Feature: domain Description: GIIM Note: maturase Location: 1361-1580 bp Feature: gene Location: 1881-2675 bp Feature: domain Description: YdfG Location: 1884-2652 bp Feature: domain Description: YdfG Location: 1884 -2652 bp Feature: gene Location: 2705-4639 bp Feature: domain Description: mycofact_OYE_2 Location: 2717-4619 bp Feature: domain Description: mycofact_OYE_2 Location: 2717-4 619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YdfG (COG4221), mycofact_OYE_2 (TIGR03997)

Seq: CAAFTB010000078.1 (29486 bp)
Overview 1 RT 1: 11564-15060 bp Neighborhood of RT #1 [11564, 15089] RpoE HipB RVT-GII ZupT MdlB Feature: gene Location: 11564-12016 bp Feature: domain Description: RpoE Location: 11606-12005 bp Feature: domain Description: RpoE Location: 11606-12005 bp Feature: gene Location: 12454-12804 bp Feature: domain Description: HipB Location: 12490-12727 bp Feature: domain Description: HipB Location: 12490-12727 bp Feature: gene Location: 13179-13757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13359-13698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1335 9-13698 bp Feature: gene Location: 13876-14643 bp Feature: domain Description: ZupT Location: 13894-14641 bp Feature: domain Description: ZupT Location: 13894-14641 bp Feature: gene Location: 14757-15089 bp Feature: domain Description: MdlB Location: 14889-15060 bp Feature: domain Description: MdlB Location: 14889-15 060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), HipB (COG1396), RVT-GII, ZupT (COG0428), MdlB (COG1132)

Seq: CAAFTB010000076.1 (11035 bp)
Overview 1 RT 1: 187-2506 bp Neighborhood of RT #1 [187, 2547] RVT-GII GIIM COG3666 DDE_Tnp_1_6 Feature: gene Location: 187-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190-421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190-421 bp Feature: domain Description: GIIM Note: maturase Location: 493-715 bp Feature: domain Description: GIIM Note: maturase Location: 493-715 bp Feature: gene Location: 852-1034 bp Feature: gene Location: 1144-2547 bp Feature: domain Description: COG3666 Location: 1198-1606 bp Feature: domain Description: COG36 6 6 Location: 1198-16 06 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2155-2506 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2155-2506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)