myRT

myRT report for GCA_900765805.1_SRS294977_11

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Seq: CAAFTA010000006.1 (17075 bp)
Overview 1 RT 1: 7630-14987 bp Neighborhood of RT #1 [7630, 15031] HTH_17 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-UG24 dnaG Feature: gene Location: 7630-8031 bp Feature: domain Description: HTH_17 Location: 7873-8020 bp Feature: domain Description: HTH_1 7 Location: 7873-8020 bp Feature: gene Location: 8169-9374 bp Feature: domain Description: Arm-DNA-bind_5 Location: 8202-8418 bp Feature: domain Description: Arm-DNA-bind_5 Location: 8202-841 8 bp Feature: domain Description: Phage_int_SAM_5 Location: 8556-8784 bp Feature: domain Description: Phage_int_SAM_5 Location: 8556-8784 bp Feature: domain Description: INTN1_C_like Location: 8856-9360 bp Feature: domain Description: INTN1 _C_like Location: 8856-9360 bp Feature: gene Location: 9811-13248 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 10321-10786 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 1 0321 -1 0786 bp Feature: gene Location: 13250-13990 bp Feature: gene Location: 13997-15031 bp Feature: domain Description: dnaG Location: 14084-14987 bp Feature: domain Description: dnaG Location: 1 4084-1 4987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-UG24, dnaG (TIGR01391)

Seq: CAAFTA010000018.1 (50978 bp)
Overview 1 RT 1: 422-2717 bp Neighborhood of RT #1 [422, 2717] RVT_N RVT-GII GIIM Feature: gene Location: 422-2083 bp Feature: domain Description: RVT_N Location: 476-719 bp Feature: domain Description: RVT_N Location: 476-719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1412 bp Feature: domain Description: GIIM Note: maturase Location: 1463-1697 bp Feature: domain Description: GIIM Note: maturase Location: 1463-1697 bp Feature: gene Location: 2202-2420 bp Feature: gene Location: 2562-2717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAAFTA010000106.1 (5166 bp)
Overview 1 RT 1: 715-5164 bp Neighborhood of RT #1 [715, 5164] AAA-ATPase_like AAA-ATPase_like RVT-GII Feature: gene Location: 715-1494 bp Feature: domain Description: AAA-ATPase_like Location: 724-1027 bp Feature: domain Description: AAA-ATPase_like Location: 724-1027 bp Feature: gene Location: 1579-2094 bp Feature: domain Description: AAA-ATPase_like Location: 1603-1996 bp Feature: domain Description: AAA-ATPase_like Location: 1603 -1996 bp Feature: gene Location: 2330-3031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2678-3020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2678-3 020 bp Feature: gene Location: 3227-5164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA-ATPase_like (pfam09820), RVT-GII