myRT

myRT report for GCA_900766665.1_SRS475585_45

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Seq: CAAFWF010001178.1 (4609 bp)
Overview 1 RT 1: 1-3193 bp Neighborhood of RT #1 [1, 3252] RVT-GII GIIM Phage_int_SAM_4 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 1-1119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-640 bp Feature: domain Description: GIIM Note: maturase Location: 694-901 bp Feature: domain Description: GIIM Note: maturase Location: 694-901 bp Feature: gene Location: 1280-2311 bp Feature: domain Description: Phage_int_SAM_4 Location: 1346-1586 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 346-1 586 bp Feature: domain Description: INT_RitC_C_like Location: 1670-2219 bp Feature: domain Description: INT_RitC_C_like Location: 1 670-221 9 bp Feature: gene Location: 2308-3252 bp Feature: domain Description: INT_RitB_C_like Location: 2626-3193 bp Feature: domain Description: INT_RitB_C_like Location: 2626-31 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Phage_int_SAM_4 (pfam13495), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797)

Seq: CAAFWF010000266.1 (1622 bp)
Overview 1 RT 1: 1-1142 bp Neighborhood of RT #1 [1, 1621] RVT-UG27 Feature: gene Location: 1-162 bp Feature: gene Location: 729-872 bp Feature: gene Location: 878-1621 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 884-1142 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 884-1142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: CAAFWF010001645.1 (1044 bp)
Overview 1 RT 1: 3-1036 bp Neighborhood of RT #1 [3, 1041] PRK12704 RNase_Y RVT-DGRs Feature: gene Location: 3-383 bp Feature: domain Description: PRK12704 Location: 9-378 bp Feature: domain Description: PRK12704 Location: 9-3 78 bp Feature: gene Location: 429-629 bp Feature: domain Description: RNase_Y Location: 435-627 bp Feature: domain Description: RNase_Y Location: 43 5-627 bp Feature: gene Location: 916-1041 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 922-1036 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 922-103 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12704 (phosphodiesterase; Provisional), RNase_Y (TIGR03319), RVT-DGRs

Seq: CAAFWF010000348.1 (1268 bp)
Overview 1 RT 1: 1-826 bp Neighborhood of RT #1 [1, 1113] RVT-UG2 Feature: gene Location: 1-1113 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4-826 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4 -826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2