myRT

myRT report for GCA_900766725.1_SRS475625_31

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Seq: CAAFWL010000137.1 (10562 bp)
Overview 1 RT 1: 364-8012 bp Neighborhood of RT #1 [364, 8012] COG3943 RVT-UG3 RVT-UG8 KAP_NTPase Feature: gene Location: 364-1302 bp Feature: domain Description: COG3943 Location: 415-859 bp Feature: domain Description: COG3943 Location: 41 5-859 bp Feature: gene Location: 1519-3051 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2017-2548 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 201 7-2548 bp Feature: gene Location: 3020-5308 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3632-4085 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3632-4085 bp Feature: gene Location: 5473-7278 bp Feature: domain Description: KAP_NTPase Location: 5527-6580 bp Feature: domain Description: KAP_NTPase Location: 5527-6580 bp Feature: gene Location: 7290-8012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3943 (Uncharacterized conserved protein ), RVT-UG3, RVT-UG8, KAP_NTPase (pfam07693)

Seq: CAAFWL010000116.1 (42814 bp)
Overview 1 RT 1: 33580-39377 bp Neighborhood of RT #1 [33580, 39377] RVT-DGRs Feature: gene Location: 33580-34803 bp Feature: gene Location: 34816-36303 bp Feature: gene Location: 36729-38093 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36954-37545 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36954-37545 bp Feature: gene Location: 38115-38486 bp Feature: gene Location: 38499-39377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CAAFWL010000174.1 (33865 bp)
Overview 1 RT 1: 6198-9076 bp Neighborhood of RT #1 [6198, 9076] greA Hit RVT-GII GIIM Feature: gene Location: 6198-6665 bp Feature: domain Description: greA Location: 6207-6657 bp Feature: domain Description: greA Location: 6207-6657 bp Feature: gene Location: 6776-7177 bp Feature: domain Description: Hit Location: 6782-7163 bp Feature: domain Description: Hit Location: 6782-7163 bp Feature: gene Location: 7253-8590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7454-8072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7454-8072 bp Feature: domain Description: GIIM Note: maturase Location: 8126-8333 bp Feature: domain Description: GIIM Note: maturase Location: 8126-83 3 3 bp Feature: gene Location: 8591-8794 bp Feature: gene Location: 8897-9076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT greA (TIGR01462), Hit (COG0537), RVT-GII, GIIM (pfam08388)

Seq: CAAFWL010000187.1 (3570 bp)
Overview 1 RT 1: 480-3388 bp Neighborhood of RT #1 [480, 3567] AAAA RVT-GII GIIM Feature: gene Location: 480-1928 bp Feature: domain Description: AAAA Location: 501-1284 bp Feature: domain Description: AAAA Location: 501-1284 bp Feature: gene Location: 2286-2708 bp Feature: gene Location: 2689-3567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2695-3121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2695-3121 bp Feature: domain Description: GIIM Note: maturase Location: 3178-3388 bp Feature: domain Description: GIIM Note: maturase Location: 3178-3388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAAA (COG1672), RVT-GII, GIIM (pfam08388)