myRT

myRT report for GCA_900766925.1_SRS475647_33

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Seq: CAAFXG010000226.1 (1276 bp)
Overview 1 RT 1: 1-703 bp Neighborhood of RT #1 [1, 879] RVT-GII GIIM Feature: gene Location: 1-879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-421 bp Feature: domain Description: GIIM Note: maturase Location: 481-703 bp Feature: domain Description: GIIM Note: maturase Location: 481 -703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAAFXG010000075.1 (7605 bp)
Overview 1 RT 1: 2315-7603 bp Neighborhood of RT #1 [2315, 7603] AbiEii COG5340 DUF4041 RVT-UG3 DUF4041 RVT-UG8 Feature: gene Location: 2315-2812 bp Feature: domain Description: AbiEii Location: 2432-2789 bp Feature: domain Description: AbiEii Location: 2 432 -2 789 bp Feature: gene Location: 2809-3372 bp Feature: domain Description: COG5340 Location: 2890-3328 bp Feature: domain Description: COG5340 Location: 2 890-332 8 bp Feature: gene Location: 3697-5154 bp Feature: domain Description: DUF4041 Location: 3736-3808 bp Feature: domain Description: DUF4041 Location: 3736-3808 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4153-4684 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4153-4684 bp Feature: domain Description: DUF4041 Location: 4699-4834 bp Feature: domain Description: DUF4041 Location: 4699-4834 bp Feature: gene Location: 5151-7325 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5754-6210 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5754-62 10 bp Feature: gene Location: 7454-7603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), DUF4041 (pfam13250), RVT-UG3, RVT-UG8

Seq: CAAFXG010000391.1 (17819 bp)
Overview 1 RT 1: 5695-10892 bp Neighborhood of RT #1 [5695, 10892] WYL RVT-Retrons Feature: gene Location: 5695-6798 bp Feature: domain Description: WYL Location: 6193-6751 bp Feature: domain Description: WYL Location: 6193 -6751 bp Feature: gene Location: 6839-6985 bp Feature: gene Location: 7297-8799 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7495-8110 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7495-8110 bp Feature: gene Location: 8802-9644 bp Feature: gene Location: 9648-10892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-Retrons