myRT

myRT report for GCA_900767315.1_SRS475933_24

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Seq: CAAFYQ010000004.1 (16300 bp)
Overview 1 RT 1: 12383-15568 bp Neighborhood of RT #1 [12383, 15582] DUF1016_N YhcG_C PDDEXK_2 RVT-DGRs Avd_like MutS MutS Feature: gene Location: 12383-13378 bp Feature: domain Description: DUF1016_N Location: 12404-12812 bp Feature: domain Description: DUF1 01 6_N Location: 1 2404-1 281 2 bp Feature: domain Description: YhcG_C Location: 12890-13340 bp Feature: domain Description: YhcG_C Location: 1 2890-1 3340 bp Feature: gene Location: 13550-13783 bp Feature: domain Description: PDDEXK_2 Location: 13583-13766 bp Feature: domain Description: PDDEXK_2 Location: 1 3583-1 3766 bp Feature: gene Location: 13830-14834 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13992-14595 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 3992-1 4595 bp Feature: gene Location: 14870-15229 bp Feature: domain Description: Avd_like Location: 14900-15218 bp Feature: domain Description: Avd_like Location: 1 4900-1 521 8 bp Feature: gene Location: 15226-15582 bp Feature: domain Description: MutS Location: 15235-15487 bp Feature: domain Description: MutS Location: 1 5235-1 5487 bp Feature: domain Description: MutS Location: 15487-15568 bp Feature: domain Description: MutS Location: 1 5487-1 5568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1016_N (pfam17761), YhcG_C, PDDEXK_2 (pfam12784), RVT-DGRs, Avd_like (cd16376), MutS (COG0249)

Seq: CAAFYQ010000011.1 (48961 bp)
Overview 1 RT 1: 14512-21687 bp Neighborhood of RT #1 [14512, 22232] COG0610 COG1373 RVT-UG2 AmiC predic_Ig_block Feature: gene Location: 14512-17274 bp Feature: domain Description: COG0610 Location: 14521-17143 bp Feature: domain Description: COG0610 Location: 1452 1-17143 bp Feature: gene Location: 17302-18498 bp Feature: domain Description: COG1373 Location: 17314-18493 bp Feature: domain Description: COG1373 Location: 17314-18493 bp Feature: gene Location: 18764-20125 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 18962-19805 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 18962 -19805 bp Feature: gene Location: 20599-20892 bp Feature: domain Description: AmiC Location: 20608-20878 bp Feature: domain Description: AmiC Location: 2 0608-2 0878 bp Feature: gene Location: 20994-22232 bp Feature: domain Description: predic_Ig_block Location: 21009-21687 bp Feature: domain Description: predic_Ig_block Location: 2 1009-2 1687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG2, AmiC (COG0860), predic_Ig_block (TIGR04526)