myRT

myRT report for GCA_900767545.1_SRS475986_71

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Seq: CAAFZM010000356.1 (47991 bp)
Overview 1 RT 1: 1683-6513 bp Neighborhood of RT #1 [1683, 6513] DUF4238 RVT-Retrons HxlR Feature: gene Location: 1683-2684 bp Feature: domain Description: DUF4238 Location: 1704-2571 bp Feature: domain Description: DUF4238 Location: 1 704-2571 bp Feature: gene Location: 2716-4086 bp Feature: gene Location: 4083-5234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4419-4971 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 441 9-4971 bp Feature: gene Location: 5322-5672 bp Feature: domain Description: HxlR Location: 5376-5550 bp Feature: domain Description: HxlR Location: 5376-5550 bp Feature: gene Location: 5641-6513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFZM010000298.1 (2013 bp)
Overview 1 RT 1: 1-1949 bp Neighborhood of RT #1 [1, 2011] AAA_14 RVT-GII Feature: gene Location: 1-423 bp Feature: domain Description: AAA_14 Location: 121-424 bp Feature: domain Description: AAA_14 Location: 12 1-42 4 bp Feature: gene Location: 773-943 bp Feature: gene Location: 989-2011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1331-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1331-1949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFZM010000296.1 (45150 bp)
Overview 1 RT 1: 1-3025 bp Neighborhood of RT #1 [1, 3030] RVT-GII GH27 Melibiase_C Feature: gene Location: 1-525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-523 bp Feature: gene Location: 765-1703 bp Feature: gene Location: 1810-3030 bp Feature: domain Description: GH27 Location: 1915-2767 bp Feature: domain Description: GH27 Location: 1915-2767 bp Feature: domain Description: Melibiase_C Location: 2806-3025 bp Feature: domain Description: Melibiase_C Location: 2806-3 025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFZM010000016.1 (3333 bp)
Overview 1 RT 1: 1-3332 bp Neighborhood of RT #1 [1, 3332] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-567 bp Feature: gene Location: 682-900 bp Feature: gene Location: 1143-2975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1407-2238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 07-2238 bp Feature: domain Description: Intron_maturas2 Location: 2310-2625 bp Feature: domain Description: Intron_maturas2 Location: 2310-2625 bp Feature: domain Description: HNHc Note: nucleases Location: 2772-2946 bp Feature: domain Description: HNHc Note: nucleases Location: 2772-294 6 bp Feature: gene Location: 3051-3332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFZM010000396.1 (2748 bp)
Overview 1 RT 1: 3-2745 bp Neighborhood of RT #1 [3, 2745] RVT-GII Intron_maturas2 Feature: gene Location: 3-146 bp Feature: gene Location: 156-1964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1242 bp Feature: domain Description: Intron_maturas2 Location: 1353-1623 bp Feature: domain Description: Intron_maturas2 Location: 135 3-1623 bp Feature: gene Location: 2533-2745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAFZM010000189.1 (6109 bp)
Overview 1 RT 1: 192-5400 bp Neighborhood of RT #1 [192, 5402] RVT-GII GIIM ligand_gated_channel ligand_gated_channel Feature: gene Location: 192-1598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-1152 bp Feature: domain Description: GIIM Note: maturase Location: 1209-1410 bp Feature: domain Description: GIIM Note: maturase Location: 1209-1410 bp Feature: gene Location: 2098-3255 bp Feature: gene Location: 3297-5402 bp Feature: domain Description: ligand_gated_channel Location: 3462-3627 bp Feature: domain Description: ligand_gated_channel Location: 346 2-36 27 bp Feature: domain Description: ligand_gated_channel Location: 3867-5400 bp Feature: domain Description: ligand_gated_channel Location: 386 7-5400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT