myRT

myRT report for GCA_900767835.1_SRS476020_85

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Seq: CAAGAO010000010.1 (50239 bp)
Overview 1 RT 1: 1213-6107 bp Neighborhood of RT #1 [1213, 6107] DUF4363 CbpA RVT-DGRs Avd_like Feature: gene Location: 1213-1602 bp Feature: domain Description: DUF4363 Location: 1282-1597 bp Feature: domain Description: DUF4363 Location: 1 282-1 597 bp Feature: gene Location: 1607-2200 bp Feature: domain Description: CbpA Location: 1610-2000 bp Feature: domain Description: CbpA Location: 1 61 0-2000 bp Feature: gene Location: 2447-3475 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2645-3251 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2645-3251 bp Feature: gene Location: 3852-4424 bp Feature: domain Description: Avd_like Location: 4056-4392 bp Feature: domain Description: Avd_like Location: 4056-4392 bp Feature: gene Location: 4548-6107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4363 (pfam14276), CbpA (COG2214), RVT-DGRs, Avd_like (cd16376)

Seq: CAAGAO010000029.1 (65604 bp)
Overview 1 RT 1: 16539-22030 bp Neighborhood of RT #1 [16539, 22030] HsdM HTH_31 RVT-UG15 INT_ICEBs1_C_like Feature: gene Location: 16539-18644 bp Feature: domain Description: HsdM Location: 16602-18147 bp Feature: domain Description: HsdM Location: 16602 -18147 bp Feature: gene Location: 18649-18984 bp Feature: domain Description: HTH_31 Location: 18697-18877 bp Feature: domain Description: HTH_31 Location: 18697-18877 bp Feature: gene Location: 19468-21027 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 19840-20287 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 19840-2 02 87 bp Feature: gene Location: 21081-21509 bp Feature: domain Description: INT_ICEBs1_C_like Location: 21147-21285 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2 1147-2 12 85 bp Feature: gene Location: 21797-22030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), HTH_31 (pfam13560), RVT-UG15, INT_ICEBs1_C_like (cd01189)

Seq: CAAGAO010000003.1 (57743 bp)
Overview 1 RT 1: 7346-12413 bp 2 RT 2: 31712-34335 bp Neighborhood of RT #1 [7346, 12413] RVT-Retrons Resolvase Recombinase Zn_ribbon_recom Neighborhood of RT #2 [31712, 34335] RVT-DGRs Feature: gene Location: 7346-7546 bp Feature: gene Location: 7561-7824 bp Feature: gene Location: 8110-9780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8224-8824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8224-8824 bp Feature: gene Location: 10084-11568 bp Feature: domain Description: Resolvase Location: 10096-10531 bp Feature: domain Description: Resolvase Location: 10096-1053 1 bp Feature: domain Description: Recombinase Location: 10591-10849 bp Feature: domain Description: Recombinase Location: 10591-10849 bp Feature: domain Description: Zn_ribbon_recom Location: 10891-11062 bp Feature: domain Description: Zn_ribbon_recom Location: 10891-11062 bp Feature: gene Location: 11790-12413 bp Feature: gene Location: 31712-32071 bp Feature: gene Location: 32186-32473 bp Feature: gene Location: 32460-33563 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32757-33366 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 2757-3 3 3 66 bp Feature: gene Location: 33634-33819 bp Feature: gene Location: 33820-34335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-DGRs