myRT

myRT report for GCA_900767915.1_SRS476035_64

Download annotations/find similar RTs

Seq: CAAGAX010000033.1 (63060 bp)
Overview 1 RT 1: 36923-41088 bp Neighborhood of RT #1 [36923, 41088] TypA group_II_RT_mat RVT-GII Flg_new Feature: gene Location: 36923-38755 bp Feature: domain Description: TypA Location: 36926-38723 bp Feature: domain Description: TypA Location: 36926-38723 bp Feature: gene Location: 39298-39453 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 39331-39439 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 39331 -39439 bp Feature: gene Location: 39453-39716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39498-39711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39498-3971 1 bp Feature: gene Location: 40036-40743 bp Feature: domain Description: Flg_new Location: 40528-40735 bp Feature: domain Description: Flg_new Location: 40528-40735 bp Feature: gene Location: 40786-41088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TypA (COG1217), group_II_RT_mat (TIGR04416), RVT-GII, Flg_new (pfam09479)

Seq: CAAGAX010000024.1 (3893 bp)
Overview 1 RT 1: 150-3891 bp Neighborhood of RT #1 [150, 3891] RVT-UG24 HDc Feature: gene Location: 150-3419 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 669-1113 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 669-1113 bp Feature: domain Description: HDc Location: 2385-2910 bp Feature: domain Description: HDc Location: 2 385-2 910 bp Feature: gene Location: 3400-3891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, HDc (smart00471)

Seq: CAAGAX010000023.1 (56687 bp)
Overview 1 RT 1: 21706-27397 bp Neighborhood of RT #1 [21706, 27408] RnfB MTH1 RVT-GII MelB PRK03906 PRK03906 Feature: gene Location: 21706-22026 bp Feature: domain Description: RnfB Location: 21715-21988 bp Feature: domain Description: RnfB Location: 21715-21988 bp Feature: gene Location: 22083-22514 bp Feature: domain Description: MTH1 Location: 22095-22491 bp Feature: domain Description: MTH1 Location: 22095-22491 bp Feature: gene Location: 23254-23535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23362-23530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 3 62-23 53 0 bp Feature: gene Location: 24584-26368 bp Feature: domain Description: MelB Location: 24764-26114 bp Feature: domain Description: MelB Location: 24764-26114 bp Feature: gene Location: 26365-27408 bp Feature: domain Description: PRK03906 Location: 26368-26791 bp Feature: domain Description: PRK03 906 Location: 263 68-26791 bp Feature: domain Description: PRK03906 Location: 26794-27397 bp Feature: domain Description: PRK03 906 Location: 26794-273 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RnfB (COG2878), MTH1, RVT-GII, MelB (COG2211), PRK03906 (mannonate dehydratase; Provisional)

Seq: CAAGAX010000007.1 (18562 bp)
Overview 1 RT 1: 16348-18001 bp Neighborhood of RT #1 [16348, 18012] Acetyltransf_1 RVT-GII Feature: gene Location: 16348-16800 bp Feature: domain Description: Acetyltransf_1 Location: 16414-16726 bp Feature: domain Description: Acetyltransf_1 Location: 164 14 -16726 bp Feature: gene Location: 16888-17358 bp Feature: gene Location: 17884-18012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17887-18001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17887-18001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII