myRT

myRT report for GCA_900769125.1_SRS476160_51

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Seq: CAAGFK010000339.1 (57546 bp)
Overview 1 RT 1: 4211-9824 bp Neighborhood of RT #1 [4211, 12085] PDDEXK_2 RVT-AbiP2 Peptidase_C10 Metallophos_2 Feature: gene Location: 4211-4639 bp Feature: domain Description: PDDEXK_2 Location: 4241-4493 bp Feature: domain Description: PDDEXK_2 Location: 4241 -4493 bp Feature: gene Location: 5103-5591 bp Feature: gene Location: 5614-7134 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6043-6499 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6043-6499 bp Feature: gene Location: 7210-8970 bp Feature: domain Description: Peptidase_C10 Location: 7357-7924 bp Feature: domain Description: Peptidase_C1 0 Location: 7357-7924 bp Feature: gene Location: 8960-12085 bp Feature: domain Description: Metallophos_2 Location: 9002-9824 bp Feature: domain Description: Metallophos_2 Location: 9002-9824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT-AbiP2, Peptidase_C10 (pfam01640), Metallophos_2 (pfam12850)

Seq: CAAGFK010000005.1 (2931 bp)
Overview 1 RT 1: 482-2835 bp Neighborhood of RT #1 [482, 2930] RVT-GII GIIM UraA Feature: gene Location: 482-1771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1406 bp Feature: domain Description: GIIM Note: maturase Location: 1487-1700 bp Feature: domain Description: GIIM Note: maturase Location: 1487-1700 bp Feature: gene Location: 1863-2057 bp Feature: gene Location: 2550-2930 bp Feature: domain Description: UraA Location: 2553-2835 bp Feature: domain Description: UraA Location: 2 553-2 835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), UraA (COG2233)

Seq: CAAGFK010000261.1 (6002 bp)
Overview 1 RT 1: 3802-5990 bp Neighborhood of RT #1 [3802, 6001] RVT-GII Feature: gene Location: 3802-4458 bp Feature: gene Location: 4725-5468 bp Feature: gene Location: 5720-6001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5810-5990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5810-5990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAGFK010000354.1 (6422 bp)
Overview 1 RT 1: 168-6312 bp Neighborhood of RT #1 [168, 6323] NGN_SP_UpxY KOW_NusG RVT-AbiP2 DUF1848 DEXQc_UvrD DEXQc_UvrD UvrD Feature: gene Location: 168-896 bp Feature: domain Description: NGN_SP_UpxY Location: 342-672 bp Feature: domain Description: NGN_SP_UpxY Location: 34 2-672 bp Feature: domain Description: KOW_NusG Location: 723-828 bp Feature: domain Description: KOW_NusG Location: 723-828 bp Feature: gene Location: 910-2577 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1348-1807 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 134 8-1807 bp Feature: gene Location: 2641-3705 bp Feature: domain Description: DUF1848 Location: 2710-3625 bp Feature: domain Description: DUF184 8 Location: 2710-3625 bp Feature: gene Location: 3708-6323 bp Feature: domain Description: DEXQc_UvrD Location: 5199-5397 bp Feature: domain Description: DEXQc_UvrD Location: 5199-5397 bp Feature: domain Description: DEXQc_UvrD Location: 5481-5616 bp Feature: domain Description: DEXQc_UvrD Location: 54 81-5616 bp Feature: domain Description: UvrD Location: 5871-6312 bp Feature: domain Description: UvrD Location: 5871-6312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NGN_SP_UpxY (cd09895), KOW_NusG (cd06091), RVT-AbiP2, DUF1848 (pfam08902), DEXQc_UvrD (cd17932), UvrD (COG0210)

Seq: CAAGFK010000186.1 (32152 bp)
Overview 1 RT 1: 21605-24780 bp Neighborhood of RT #1 [21605, 24780] DpnD-PcfM RVT-UG27 Feature: gene Location: 21605-21775 bp Feature: domain Description: DpnD-PcfM Location: 21620-21722 bp Feature: domain Description: DpnD-PcfM Location: 21620-21722 bp Feature: gene Location: 22043-22243 bp Feature: gene Location: 22948-24213 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 23140-23773 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 23140-23773 bp Feature: gene Location: 24261-24422 bp Feature: gene Location: 24472-24780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DpnD-PcfM (pfam14207), RVT-UG27

Seq: CAAGFK010000290.1 (2577 bp)
Overview 1 RT 1: 410-2358 bp Neighborhood of RT #1 [410, 2381] RVT-GII GIIM Penicillinase_R Feature: gene Location: 410-553 bp Feature: gene Location: 540-1823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-136 5 bp Feature: domain Description: GIIM Note: maturase Location: 1425-1653 bp Feature: domain Description: GIIM Note: maturase Location: 1425-16 53 bp Feature: gene Location: 2013-2381 bp Feature: domain Description: Penicillinase_R Location: 2028-2358 bp Feature: domain Description: Penicillinase_R Location: 2028-2358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Penicillinase_R (pfam03965)