myRT

myRT report for GCA_900769965.1_SRS476289_51

Download annotations/find similar RTs

Seq: CAAGIQ010000110.1 (2534 bp)
Overview 1 RT 1: 1-2272 bp Neighborhood of RT #1 [1, 2445] LysU RVT-GII GIIM Feature: gene Location: 1-651 bp Feature: domain Description: LysU Location: 10-646 bp Feature: domain Description: LysU Location: 1 0-646 bp Feature: gene Location: 1162-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1366-1981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 366-1 981 bp Feature: domain Description: GIIM Note: maturase Location: 2041-2272 bp Feature: domain Description: GIIM Note: maturase Location: 2041 -2272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysU (COG1190), RVT-GII, GIIM (pfam08388)

Seq: CAAGIQ010000200.1 (8432 bp)
Overview 1 RT 1: 7106-8431 bp Neighborhood of RT #1 [7106, 8430] RVT-GII Feature: gene Location: 7106-7735 bp Feature: gene Location: 7913-8200 bp Feature: gene Location: 8287-8430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8293-8431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 93-8431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAGIQ010000172.1 (9424 bp)
Overview 1 RT 1: 6501-9249 bp Neighborhood of RT #1 [6501, 9422] COG2865 RVT-GII GIIM Feature: gene Location: 6501-6905 bp Feature: gene Location: 7226-8680 bp Feature: domain Description: COG2865 Location: 7256-8576 bp Feature: domain Description: COG2865 Location: 7256-8576 bp Feature: gene Location: 8862-9422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8868-8955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8868-8955 bp Feature: domain Description: GIIM Note: maturase Location: 9015-9249 bp Feature: domain Description: GIIM Note: maturase Location: 9015-9249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-GII, GIIM (pfam08388)

Seq: CAAGIQ010000012.1 (4963 bp)
Overview 1 RT 1: 143-4940 bp Neighborhood of RT #1 [143, 4960] RVT-GII GIIM COG3666 DDE_Tnp_1_6 COG1373 Feature: gene Location: 143-1486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 7-965 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1265 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1265 bp Feature: gene Location: 2062-3564 bp Feature: domain Description: COG3666 Location: 2119-2464 bp Feature: domain Description: COG3666 Location: 2119-24 64 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3115-3493 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3115-34 93 bp Feature: gene Location: 3860-4960 bp Feature: domain Description: COG1373 Location: 3872-4940 bp Feature: domain Description: COG1373 Location: 3872-4 94 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), COG1373 (Predicted ATPase, AAA+ superfamily )

Seq: CAAGIQ010000022.1 (2225 bp)
Overview 1 RT 1: 196-2213 bp Neighborhood of RT #1 [196, 2224] RVT-GII KOG4768 TPP_PFOR_PNO Feature: gene Location: 196-1461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397-1015 bp Feature: domain Description: KOG4768 Location: 1114-1441 bp Feature: domain Description: KOG4768 Location: 1114-1441 bp Feature: gene Location: 2009-2224 bp Feature: domain Description: TPP_PFOR_PNO Location: 2012-2213 bp Feature: domain Description: TPP_PFOR_PNO Location: 2012-2213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), TPP_PFOR_PNO (cd03377)

Seq: CAAGIQ010000098.1 (1064 bp)
Overview 1 RT 1: 641-1043 bp Neighborhood of RT #1 [641, 1063] RVT-GII Feature: gene Location: 641-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII