myRT

myRT report for GCA_900770785.1_SRS476348_60

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Seq: CAAGLJ010000042.1 (15600 bp)
Overview 1 RT 1: 11402-14843 bp Neighborhood of RT #1 [11402, 14843] AbiEii COG5340 RVT-GII GIIM Feature: gene Location: 11402-11773 bp Feature: domain Description: AbiEii Location: 11507-11738 bp Feature: domain Description: AbiEii Location: 1 1 507-1 1 738 bp Feature: gene Location: 11766-12389 bp Feature: domain Description: COG5340 Location: 11889-12279 bp Feature: domain Description: COG5340 Location: 1 1 889-1 2279 bp Feature: gene Location: 12629-14020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12944-13568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2944-1 3568 bp Feature: domain Description: GIIM Note: maturase Location: 13625-13853 bp Feature: domain Description: GIIM Note: maturase Location: 1 3625-1 3853 bp Feature: gene Location: 14346-14516 bp Feature: gene Location: 14535-14843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-GII, GIIM (pfam08388)

Seq: CAAGLJ010000214.1 (11854 bp)
Overview 1 RT 1: 6462-11144 bp Neighborhood of RT #1 [6462, 11144] R_hydratase LysR PTZ00350 RVT-CRISPR-like Feature: gene Location: 6462-6878 bp Feature: domain Description: R_hydratase Location: 6480-6864 bp Feature: domain Description: R_hydratase Location: 6480-6864 bp Feature: gene Location: 7162-8130 bp Feature: domain Description: LysR Location: 7177-8053 bp Feature: domain Description: LysR Location: 7177-8053 bp Feature: gene Location: 8161-8478 bp Feature: domain Description: PTZ00350 Location: 8167-8305 bp Feature: domain Description: PTZ00350 Location: 8167-8305 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 8305-8452 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 8305-8452 bp Feature: gene Location: 8512-9777 bp Feature: gene Location: 9846-11144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R_hydratase (cd03449), LysR (COG0583), PTZ00350 (adenylosuccinate synthetase; Provisional), RVT-CRISPR

Seq: CAAGLJ010000001.1 (15656 bp)
Overview 1 RT 1: 3-2425 bp Neighborhood of RT #1 [3, 2430] RVT-GII GIIM DUF3842 Aldose_epim_lacX Feature: gene Location: 3-707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-249 bp Feature: domain Description: GIIM Note: maturase Location: 309-522 bp Feature: domain Description: GIIM Note: maturase Location: 3 09-522 bp Feature: gene Location: 972-1391 bp Feature: domain Description: DUF3842 Location: 978-1359 bp Feature: domain Description: DUF3 842 Location: 978-13 59 bp Feature: gene Location: 1549-2430 bp Feature: domain Description: Aldose_epim_lacX Location: 1558-2425 bp Feature: domain Description: Aldose_epim_lacX Location: 1558-2425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3842 (pfam12953), Aldose_epim_lacX (cd09024)