myRT

myRT report for GCA_900772475.1_SRS820627_28

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Seq: CAAHEI010000094.1 (113767 bp)
Overview 1 RT 1: 31200-35539 bp Neighborhood of RT #1 [31200, 35640] Hypoth_Ymh group_II_RT_mat RVT-UG13 VbhA_like FIDO HTH_24 DUF4145 Feature: gene Location: 31200-31493 bp Feature: gene Location: 31542-32426 bp Feature: domain Description: Hypoth_Ymh Location: 32031-32391 bp Feature: domain Description: Hypoth_Ymh Location: 32031 -32391 bp Feature: gene Location: 32444-33763 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 32552-32768 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 32552-32768 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 32849-33329 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 32849-33329 bp Feature: gene Location: 33794-34849 bp Feature: domain Description: VbhA_like Location: 33875-34010 bp Feature: domain Description: VbhA_like Location: 33875-3401 0 bp Feature: domain Description: FIDO Location: 34043-34595 bp Feature: domain Description: FIDO Location: 34043-34595 bp Feature: domain Description: HTH_24 Location: 34685-34808 bp Feature: domain Description: HTH_24 Location: 34685-34808 bp Feature: gene Location: 34975-35640 bp Feature: domain Description: DUF4145 Location: 35287-35539 bp Feature: domain Description: DUF41 45 Location: 35287-35539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hypoth_Ymh (pfam09509), group_II_RT_mat (TIGR04416), RVT-UG13, VbhA_like (cl17006), FIDO (COG2184), HTH_24 (pfam13412), DUF4145 (pfam13643)

Seq: CAAHEI010000039.1 (80000 bp)
Overview 1 RT 1: 65008-70079 bp Neighborhood of RT #1 [65008, 70249] rve RVT-GII RVT-GII GIIM COG3393 PRK02186 Feature: gene Location: 65008-66198 bp Feature: domain Description: rve Location: 65365-65725 bp Feature: domain Description: rve Location: 65365-6572 5 bp Feature: gene Location: 66255-66407 bp Feature: gene Location: 66912-67214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67113-67212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67113-672 12 bp Feature: gene Location: 67440-68189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67443-67731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67443-67731 bp Feature: domain Description: GIIM Note: maturase Location: 67788-68007 bp Feature: domain Description: GIIM Note: maturase Location: 67788-68007 bp Feature: gene Location: 68268-69014 bp Feature: domain Description: COG3393 Location: 68730-68970 bp Feature: domain Description: COG3393 Location: 68730-68970 bp Feature: gene Location: 69107-70249 bp Feature: domain Description: PRK02186 Location: 69161-70079 bp Feature: domain Description: PRK02 186 Location: 69161-70079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII, GIIM (pfam08388), COG3393 (Predicted acetyltransferase, GNAT family ), PRK02186 (argininosuccinate lyase; Provisional)