myRT

myRT report for GCA_900774215.1_25293_8_118-2

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Seq: CAAGTL010000016.1 (50676 bp)
Overview 1 RT 1: 9121-15170 bp Neighborhood of RT #1 [9121, 15262] CoaE CoaE deoxycytidylate_deaminase RVT-AbiP2 Phage_GPA Feature: gene Location: 9121-10851 bp Feature: domain Description: CoaE Location: 9175-9247 bp Feature: domain Description: CoaE Location: 91 75-9247 bp Feature: domain Description: CoaE Location: 9721-10006 bp Feature: domain Description: CoaE Location: 9721 -1 0006 bp Feature: domain Description: deoxycytidylate_deaminase Location: 10186-10717 bp Feature: domain Description: deoxycytidylate_deaminase Location: 1 01 86-1 071 7 bp Feature: gene Location: 11584-12087 bp Feature: gene Location: 12526-14025 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 12958-13411 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 2958-1 341 1 bp Feature: gene Location: 14172-14582 bp Feature: gene Location: 15023-15262 bp Feature: domain Description: Phage_GPA Location: 15029-15170 bp Feature: domain Description: Phage_GPA Location: 1 5029-1 51 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CoaE (pfam01121), deoxycytidylate_deaminase (cd01286), RVT-AbiP2, Phage_GPA (pfam05840)

Seq: CAAGTL010000004.1 (467860 bp)
Overview 1 RT 1: 430735-434646 bp Neighborhood of RT #1 [430735, 434666] YebF Colicin_M RVT-GII MPN_NLPC_P60 NLPC_P60 Feature: gene Location: 430735-431088 bp Feature: domain Description: YebF Location: 430822-431077 bp Feature: domain Description: YebF Location: 43082 2 -431077 bp Feature: gene Location: 431114-431932 bp Feature: domain Description: Colicin_M Location: 431153-431918 bp Feature: domain Description: Colicin_M Location: 431153-431918 bp Feature: gene Location: 432027-433514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432432-433122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432 432 -43312 2 bp Feature: gene Location: 433520-433687 bp Feature: gene Location: 433953-434666 bp Feature: domain Description: MPN_NLPC_P60 Location: 433971-434283 bp Feature: domain Description: MPN_NLPC_P60 Location: 433971-4342 83 bp Feature: domain Description: NLPC_P60 Location: 434304-434646 bp Feature: domain Description: NLPC_P60 Location: 434304-434646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YebF (pfam13995), Colicin_M (pfam14859), RVT-GII, MPN_NLPC_P60 (cd08073), NLPC_P60 (pfam00877)

Seq: CAAGTL010000023.1 (23248 bp)
Overview 1 RT 1: 21317-23246 bp Neighborhood of RT #1 [21317, 23245] RVT-GII Feature: gene Location: 21317-21538 bp Feature: gene Location: 21963-22196 bp Feature: gene Location: 22247-23245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22652-23246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22652-23 246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAGTL010000021.1 (29541 bp)
Overview 1 RT 1: 26316-29540 bp Neighborhood of RT #1 [26316, 29540] HTH_17 PHA02517 RVT-GII GIIM Feature: gene Location: 26316-26597 bp Feature: domain Description: HTH_17 Location: 26343-26487 bp Feature: domain Description: HTH_17 Location: 2634 3-264 87 bp Feature: gene Location: 26677-27141 bp Feature: domain Description: PHA02517 Location: 26740-27076 bp Feature: domain Description: PHA02517 Location: 2674 0-27076 bp Feature: gene Location: 27729-29252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28002-28734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28002-28734 bp Feature: domain Description: GIIM Note: maturase Location: 28812-29007 bp Feature: domain Description: GIIM Note: maturase Location: 28812-29007 bp Feature: gene Location: 29403-29540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)