myRT

myRT report for GCA_900774225.1_25293_8_129-2

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Seq: CAAGTP010000044.1 (1913 bp)
Overview 1 RT 1: 59-1912 bp Neighborhood of RT #1 [59, 1912] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1 1 54 bp Feature: gene Location: 1700-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAGTP010000002.1 (768056 bp)
Overview 1 RT 1: 539816-546669 bp Neighborhood of RT #1 [539816, 546686] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 539816-540481 bp Feature: domain Description: INT_P4_C Location: 539921-540479 bp Feature: domain Description: INT_P4_C Location: 53992 1-540479 bp Feature: gene Location: 540742-541182 bp Feature: domain Description: Integrase_1 Location: 540748-540964 bp Feature: domain Description: Integrase_1 Location: 540748-540964 bp Feature: gene Location: 541239-543317 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 541647-542091 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 541647-542 091 bp Feature: gene Location: 543317-545926 bp Feature: domain Description: FimD Location: 543374-545915 bp Feature: domain Description: FimD Location: 543374-545915 bp Feature: gene Location: 545958-546686 bp Feature: domain Description: FimC Location: 545991-546669 bp Feature: domain Description: FimC Location: 545991-546669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: CAAGTP010000005.1 (414425 bp)
Overview 1 RT 1: 349025-354377 bp Neighborhood of RT #1 [349025, 354514] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 349025-350296 bp Feature: domain Description: umuC Location: 349028-350288 bp Feature: domain Description: umuC Location: 3 49028-3 50288 bp Feature: gene Location: 350296-351003 bp Feature: domain Description: PRK10276 Location: 350620-350986 bp Feature: domain Description: PRK10276 Location: 3 50620-3 50986 bp Feature: gene Location: 351133-352620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351538-352228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5153 8-3 52228 bp Feature: gene Location: 352869-353840 bp Feature: domain Description: StbA Location: 352872-353817 bp Feature: domain Description: StbA Location: 3 52872-3 53 817 bp Feature: gene Location: 353843-354514 bp Feature: domain Description: Plasmid_stab_B Location: 353858-354065 bp Feature: domain Description: Plasmid_stab_B Location: 3 53 858-3 54065 bp Feature: domain Description: Plasmid_stab_B Location: 354170-354377 bp Feature: domain Description: Plasmid_stab_B Location: 3 54170-3 543 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)