myRT

myRT report for GCA_900774315.1_25293_8_11-2

Download annotations/find similar RTs

Seq: CAAGTX010000015.1 (59920 bp)
Overview 1 RT 1: 7580-10764 bp Neighborhood of RT #1 [7580, 10764] PRK10276 RVT-GII Feature: gene Location: 7580-8005 bp Feature: domain Description: PRK10276 Location: 7583-7991 bp Feature: domain Description: PRK1 0276 Location: 7583-7991 bp Feature: gene Location: 8123-8356 bp Feature: gene Location: 8407-9918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8812-9526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881 2-9526 bp Feature: gene Location: 10152-10382 bp Feature: gene Location: 10441-10764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CAAGTX010000007.1 (274343 bp)
Overview 1 RT 1: 45918-52771 bp Neighborhood of RT #1 [45918, 52788] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 45918-46583 bp Feature: domain Description: INT_P4_C Location: 46023-46581 bp Feature: domain Description: INT_P4_C Location: 4602 3-46581 bp Feature: gene Location: 46844-47284 bp Feature: domain Description: Integrase_1 Location: 46850-47066 bp Feature: domain Description: Integrase_1 Location: 46850-47066 bp Feature: gene Location: 47341-49419 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47749-48193 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47749-48193 bp Feature: gene Location: 49419-52028 bp Feature: domain Description: FimD Location: 49476-52017 bp Feature: domain Description: FimD Location: 49476-52 017 bp Feature: gene Location: 52060-52788 bp Feature: domain Description: FimC Location: 52093-52771 bp Feature: domain Description: FimC Location: 52 093-52 771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)