myRT

myRT report for GCA_900774385.1_25293_8_1-2

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Seq: CAAGUD010000007.1 (281560 bp)
Overview 1 RT 1: 258073-265590 bp Neighborhood of RT #1 [258073, 265598] PRK09692 RVT-GII PEP_TPR_lipo tol_pal_ybgF Psu Feature: gene Location: 258073-258264 bp Feature: gene Location: 258409-259680 bp Feature: domain Description: PRK09692 Location: 258418-259633 bp Feature: domain Description: PRK09692 Location: 25841 8-259633 bp Feature: gene Location: 260388-261875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260793-261483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260793-261 483 bp Feature: gene Location: 263282-264820 bp Feature: domain Description: PEP_TPR_lipo Location: 264143-264383 bp Feature: domain Description: PEP_TPR_lipo Location: 2641 43-264383 bp Feature: domain Description: tol_pal_ybgF Location: 264434-264542 bp Feature: domain Description: tol_pal_ybgF Location: 264434-264542 bp Feature: gene Location: 265032-265598 bp Feature: domain Description: Psu Location: 265050-265590 bp Feature: domain Description: Psu Location: 265050-265590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-GII, PEP_TPR_lipo (TIGR02917), tol_pal_ybgF (TIGR02795), Psu (pfam07455)

Seq: CAAGUD010000017.1 (124409 bp)
Overview 1 RT 1: 12627-18439 bp Neighborhood of RT #1 [12627, 18441] umuC RVT-UG11 PRK09951 YejM Feature: gene Location: 12627-13892 bp Feature: domain Description: umuC Location: 12630-13890 bp Feature: domain Description: umuC Location: 12 630-13890 bp Feature: gene Location: 14117-14305 bp Feature: gene Location: 14565-15473 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14838-15294 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14838-152 94 bp Feature: gene Location: 15674-16342 bp Feature: domain Description: PRK09951 Location: 15677-16340 bp Feature: domain Description: PRK09951 Location: 15677-16340 bp Feature: gene Location: 16681-18441 bp Feature: domain Description: YejM Location: 16684-18439 bp Feature: domain Description: YejM Location: 16684-18439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), YejM (COG3083)

Seq: CAAGUD010000034.1 (7255 bp)
Overview 1 RT 1: 4747-6785 bp Neighborhood of RT #1 [4747, 7177] RVT-GII Feature: gene Location: 4747-4962 bp Feature: gene Location: 5229-5807 bp Feature: gene Location: 5693-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6095-6785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6095-6785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAGUD010000010.1 (229581 bp)
Overview 1 RT 1: 48856-53402 bp Neighborhood of RT #1 [48856, 53602] AAA_15 RVT-GII PRK10276 Feature: gene Location: 48856-50775 bp Feature: domain Description: AAA_15 Location: 48922-49846 bp Feature: domain Description: AAA_15 Location: 4 8922-4 984 6 bp Feature: gene Location: 51184-51417 bp Feature: gene Location: 51468-52955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51873-52563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51873-52563 bp Feature: gene Location: 53034-53273 bp Feature: gene Location: 53276-53602 bp Feature: domain Description: PRK10276 Location: 53282-53402 bp Feature: domain Description: PRK10276 Location: 53282-534 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)