myRT

myRT report for GCA_900774405.1_25293_8_111-2

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Seq: CAAGUM010000003.1 (421734 bp)
Overview 1 RT 1: 307311-314164 bp Neighborhood of RT #1 [307311, 314181] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 307311-307976 bp Feature: domain Description: INT_P4_C Location: 307416-307974 bp Feature: domain Description: INT_P4_C Location: 30741 6-307974 bp Feature: gene Location: 308237-308677 bp Feature: domain Description: Integrase_1 Location: 308243-308459 bp Feature: domain Description: Integrase_1 Location: 308243-308459 bp Feature: gene Location: 308734-310812 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 309142-309586 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3091 42-309586 bp Feature: gene Location: 310812-313421 bp Feature: domain Description: FimD Location: 310869-313410 bp Feature: domain Description: FimD Location: 31 0869-31 341 0 bp Feature: gene Location: 313453-314181 bp Feature: domain Description: FimC Location: 313501-314164 bp Feature: domain Description: FimC Location: 31 3501 -31 41 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: CAAGUM010000027.1 (25658 bp)
Overview 1 RT 1: 10481-15044 bp Neighborhood of RT #1 [10481, 15044] umuC PRK10276 RVT-GII Feature: gene Location: 10481-11752 bp Feature: domain Description: umuC Location: 10484-11744 bp Feature: domain Description: umuC Location: 10484-11744 bp Feature: gene Location: 11752-12435 bp Feature: domain Description: PRK10276 Location: 12055-12418 bp Feature: domain Description: PRK102 76 Location: 12 055-12 418 bp Feature: gene Location: 12589-14076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12994-13684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 994-13684 bp Feature: gene Location: 14310-14540 bp Feature: gene Location: 14874-15044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII