myRT

myRT report for GCA_900774425.1_25293_8_113-2

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Seq: CAAGUH010000007.1 (328555 bp)
Overview 1 RT 1: 318241-325094 bp Neighborhood of RT #1 [318241, 325111] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 318241-318906 bp Feature: domain Description: INT_P4_C Location: 318346-318904 bp Feature: domain Description: INT_P4_C Location: 31 8346-31 8904 bp Feature: gene Location: 319167-319607 bp Feature: domain Description: Integrase_1 Location: 319173-319389 bp Feature: domain Description: Integrase_1 Location: 31 91 73-31 9389 bp Feature: gene Location: 319664-321742 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 320072-320516 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 320072-32051 6 bp Feature: gene Location: 321742-324351 bp Feature: domain Description: FimD Location: 321799-324340 bp Feature: domain Description: FimD Location: 321 799-324340 bp Feature: gene Location: 324383-325111 bp Feature: domain Description: FimC Location: 324431-325094 bp Feature: domain Description: FimC Location: 324431 -325094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: CAAGUH010000010.1 (250266 bp)
Overview 1 RT 1: 62993-69538 bp Neighborhood of RT #1 [62993, 69540] PinE RVT-GII PRK10276 umuC Feature: gene Location: 62993-65194 bp Feature: gene Location: 65286-65834 bp Feature: domain Description: PinE Location: 65289-65826 bp Feature: domain Description: PinE Location: 652 89-6582 6 bp Feature: gene Location: 66287-67774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66692-67382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66692 -67382 bp Feature: gene Location: 67853-68272 bp Feature: domain Description: PRK10276 Location: 67856-68267 bp Feature: domain Description: PRK102 76 Location: 67856-682 67 bp Feature: gene Location: 68275-69540 bp Feature: domain Description: umuC Location: 68278-69538 bp Feature: domain Description: umuC Location: 682 78-69538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)