myRT

myRT report for GCA_900774525.1_25293_8_139-2

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Seq: CAAGUS010000026.1 (12422 bp)
Overview 1 RT 1: 7815-12235 bp Neighborhood of RT #1 [7815, 12249] RVT-GII Cloacin E2R135 Cytotoxic Cloacin_immun Feature: gene Location: 7815-8060 bp Feature: gene Location: 8532-8699 bp Feature: gene Location: 8705-10192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9110-9800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 1 0-9800 bp Feature: gene Location: 10297-11982 bp Feature: domain Description: Cloacin Location: 10432-11254 bp Feature: domain Description: Cloacin Location: 1 0432-1 1 254 bp Feature: domain Description: E2R135 Location: 11263-11668 bp Feature: domain Description: E2R1 35 Location: 1 1 263-1 1 668 bp Feature: domain Description: Cytotoxic Location: 11725-11971 bp Feature: domain Description: Cytotoxic Location: 1 1 725-1 1 971 bp Feature: gene Location: 11992-12249 bp Feature: domain Description: Cloacin_immun Location: 11998-12235 bp Feature: domain Description: Cloacin_immun Location: 1 1 998-1 2235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cloacin (pfam03515), E2R135 (pfam11570), Cytotoxic (pfam09000), Cloacin_immun (pfam03513)

Seq: CAAGUS010000021.1 (30142 bp)
Overview 1 RT 1: 25626-28689 bp Neighborhood of RT #1 [25626, 28706] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 25626-26063 bp Feature: domain Description: PRK10724 Location: 25629-26058 bp Feature: domain Description: PRK1072 4 Location: 2 562 9-2 6058 bp Feature: gene Location: 26213-26695 bp Feature: domain Description: SmpB Location: 26243-26687 bp Feature: domain Description: SmpB Location: 2 62 43-2 6687 bp Feature: gene Location: 27311-27610 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27314-27425 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 7314-2 742 5 bp Feature: gene Location: 28053-28241 bp Feature: gene Location: 28488-28706 bp Feature: domain Description: PRK09678 Location: 28491-28689 bp Feature: domain Description: PRK09678 Location: 2 8491-2 8689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: CAAGUS010000033.1 (8238 bp)
Overview 1 RT 1: 137-4230 bp Neighborhood of RT #1 [137, 4295] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 137-1213 bp Feature: domain Description: COG3547 Location: 176-1097 bp Feature: domain Description: COG3 547 Location: 176-1097 bp Feature: gene Location: 1462-1668 bp Feature: gene Location: 1755-3278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2028-2760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2028-2760 bp Feature: domain Description: GIIM Note: maturase Location: 2835-3033 bp Feature: domain Description: GIIM Note: maturase Location: 283 5-3 03 3 bp Feature: gene Location: 3232-3657 bp Feature: gene Location: 3870-4295 bp Feature: domain Description: PHA02517 Location: 3894-4230 bp Feature: domain Description: PHA02517 Location: 3 894-423 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)