myRT

myRT report for GCA_900774605.1_25293_8_143-2

Download annotations/find similar RTs

Seq: CAAGVB010000016.1 (5401 bp)
Overview 1 RT 1: 1520-5185 bp Neighborhood of RT #1 [1520, 5185] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 1520-2191 bp Feature: domain Description: Plasmid_stab_B Location: 1535-1742 bp Feature: domain Description: Plasmid_stab_B Location: 1 535-1 742 bp Feature: domain Description: Plasmid_stab_B Location: 1847-2054 bp Feature: domain Description: Plasmid_stab_B Location: 1 847-2054 bp Feature: gene Location: 2194-3165 bp Feature: domain Description: StbA Location: 2197-3142 bp Feature: domain Description: StbA Location: 21 97-31 42 bp Feature: gene Location: 3414-4898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3816-4506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381 6-4506 bp Feature: gene Location: 4952-5185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: CAAGVB010000004.1 (454628 bp)
Overview 1 RT 1: 25666-30372 bp Neighborhood of RT #1 [25666, 30419] PRK10724 SmpB RVT-UG11 D COG3499 Feature: gene Location: 25666-26103 bp Feature: domain Description: PRK10724 Location: 25669-26098 bp Feature: domain Description: PRK1072 4 Location: 2 5669-2 6098 bp Feature: gene Location: 26253-26735 bp Feature: domain Description: SmpB Location: 26283-26727 bp Feature: domain Description: SmpB Location: 2 62 83-2 672 7 bp Feature: gene Location: 27351-27650 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27354-27465 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 7354-2 7465 bp Feature: gene Location: 28837-29937 bp Feature: domain Description: D Location: 28843-29923 bp Feature: domain Description: D Location: 2 8843-2 992 3 bp Feature: gene Location: 29934-30419 bp Feature: domain Description: COG3499 Location: 29937-30372 bp Feature: domain Description: COG3499 Location: 2 9937-30372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561), COG3499 (Phage protein U )