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myRT report for GCA_900774655.1_25293_8_15-2
Download annotations/find similar RTs
Seq:
CAAGVI010000006.1 (357580 bp)
Overview
1
RT 1: 86294-93147 bp
Neighborhood of RT #1 [86294, 93164]
INT_P4_C
Integrase_1
RVT-UG4
FimD
FimC
Feature: gene
Location: 86294-86959 bp
Feature: domain
Description: INT_P4_C
Location: 86399-86957 bp
Feature: domain
Description: INT_P4_C
Location: 86399-86957 bp
Feature: gene
Location: 87220-87660 bp
Feature: domain
Description: Integrase_1
Location: 87226-87442 bp
Feature: domain
Description: Integrase_1
Location: 87226-87442 bp
Feature: gene
Location: 87717-89795 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 88125-88569 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 881 25-88569 bp
Feature: gene
Location: 89795-92404 bp
Feature: domain
Description: FimD
Location: 89852-92393 bp
Feature: domain
Description: FimD
Location: 89852-92393 bp
Feature: gene
Location: 92436-93164 bp
Feature: domain
Description: FimC
Location: 92469-93147 bp
Feature: domain
Description: FimC
Location: 92469-931 47 bp
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Associated domains:
myRT
INT_P4_C (cd00801)
,
Integrase_1 (pfam12835)
,
RVT-UG4
,
FimD (COG3188)
,
FimC (COG3121)