myRT

myRT report for GCA_900774675.1_25293_8_149-2

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Seq: CAAGVH010000024.1 (29421 bp)
Overview 1 RT 1: 669-3744 bp Neighborhood of RT #1 [669, 3749] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 669-887 bp Feature: domain Description: PRK09678 Location: 672-870 bp Feature: domain Description: PRK09678 Location: 672-870 bp Feature: gene Location: 1134-1322 bp Feature: gene Location: 1765-2064 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1768-1879 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 768-1 879 bp Feature: gene Location: 2680-3162 bp Feature: domain Description: SmpB Location: 2710-3154 bp Feature: domain Description: SmpB Location: 271 0-31 54 bp Feature: gene Location: 3273-3749 bp Feature: domain Description: PRK10724 Location: 3279-3744 bp Feature: domain Description: PRK1 0724 Location: 3279-3744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: CAAGVH010000086.1 (649 bp)
Overview 1 RT 1: 1-648 bp Neighborhood of RT #1 [1, 648] RVT-GII Feature: gene Location: 1-378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-373 bp Feature: gene Location: 490-648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAGVH010000018.1 (56684 bp)
Overview 1 RT 1: 52724-56683 bp Neighborhood of RT #1 [52724, 56683] Dam HTH_23 RVT-GII Feature: gene Location: 52724-52864 bp Feature: gene Location: 53693-54361 bp Feature: domain Description: Dam Location: 53753-54065 bp Feature: domain Description: Dam Location: 53 753 -54065 bp Feature: domain Description: HTH_23 Location: 54269-54359 bp Feature: domain Description: HTH_23 Location: 54269-543 59 bp Feature: gene Location: 54833-56320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55238-55928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5523 8-55928 bp Feature: gene Location: 56474-56683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), HTH_23 (pfam13384), RVT-GII