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myRT report for GCA_900774795.1_25293_8_19-2
Download annotations/find similar RTs
Seq:
CAAGVU010000006.1 (381907 bp)
Overview
1
RT 1: 123322-130172 bp
Neighborhood of RT #1 [123322, 130192]
INT_P4_C
Integrase_1
RVT-UG4
FimD
FimC
Feature: gene
Location: 123322-123987 bp
Feature: domain
Description: INT_P4_C
Location: 123427-123985 bp
Feature: domain
Description: INT_P4_C
Location: 1 23427-1 23985 bp
Feature: gene
Location: 124248-124688 bp
Feature: domain
Description: Integrase_1
Location: 124254-124470 bp
Feature: domain
Description: Integrase_1
Location: 1 24254-1 24470 bp
Feature: gene
Location: 124745-126823 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 125153-125597 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 1 251 53-1 25597 bp
Feature: gene
Location: 126823-129432 bp
Feature: domain
Description: FimD
Location: 126880-129421 bp
Feature: domain
Description: FimD
Location: 1 26880-1 29421 bp
Feature: gene
Location: 129464-130192 bp
Feature: domain
Description: FimC
Location: 129497-130172 bp
Feature: domain
Description: FimC
Location: 1 29497-1 301 72 bp
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Associated domains:
myRT
INT_P4_C (cd00801)
,
Integrase_1 (pfam12835)
,
RVT-UG4
,
FimD (COG3188)
,
FimC (COG3121)