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myRT report for GCA_900774915.1_25293_8_25-2
Download annotations/find similar RTs
Seq:
CAAGWF010000004.1 (498413 bp)
Overview
1
RT 1: 239823-246673 bp
Neighborhood of RT #1 [239823, 246693]
INT_P4_C
Integrase_1
RVT-UG4
FimD
FimC
Feature: gene
Location: 239823-240488 bp
Feature: domain
Description: INT_P4_C
Location: 239928-240486 bp
Feature: domain
Description: INT_P4_C
Location: 239928-240486 bp
Feature: gene
Location: 240749-241189 bp
Feature: domain
Description: Integrase_1
Location: 240755-240971 bp
Feature: domain
Description: Integrase_1
Location: 240755-240971 bp
Feature: gene
Location: 241246-243324 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 241654-242098 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 241 654-242098 bp
Feature: gene
Location: 243324-245933 bp
Feature: domain
Description: FimD
Location: 243381-245922 bp
Feature: domain
Description: FimD
Location: 243381 -245922 bp
Feature: gene
Location: 245965-246693 bp
Feature: domain
Description: FimC
Location: 245998-246673 bp
Feature: domain
Description: FimC
Location: 245998-246673 bp
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Associated domains:
myRT
INT_P4_C (cd00801)
,
Integrase_1 (pfam12835)
,
RVT-UG4
,
FimD (COG3188)
,
FimC (COG3121)