myRT

myRT report for GCA_900775855.1_27097_7_111-2

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Seq: CAAGZV010000014.1 (118937 bp)
Overview 1 RT 1: 74148-81266 bp Neighborhood of RT #1 [74148, 81295] RVT-UG5 PRK04247 RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Feature: gene Location: 74148-74321 bp Feature: gene Location: 74409-74543 bp Feature: gene Location: 75269-78286 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 75767-76262 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 75767-76262 bp Feature: gene Location: 78466-79566 bp Feature: domain Description: PRK04247 Location: 78529-78760 bp Feature: domain Description: PRK04247 Location: 78529-78760 bp Feature: gene Location: 79577-81295 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 79904-80438 bp Feature: domain Description: RMtype1 _S_Ppo21 ORF8840P_TRD1 -CR1 _like Location: 79904-80438 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 80888-81266 bp Feature: domain Description: RMtype1 _S_Ppo21 ORF8840P_TRD1 -CR1 _like Location: 80888-81 266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293)

Seq: CAAGZV010000012.1 (156768 bp)
Overview 1 RT 1: 72869-76163 bp Neighborhood of RT #1 [72869, 76177] RVT-GII PRK10276 Feature: gene Location: 72869-73084 bp Feature: gene Location: 73351-73581 bp Feature: gene Location: 73815-75350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74220-74958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 2 0-74958 bp Feature: gene Location: 75401-75634 bp Feature: gene Location: 75752-76177 bp Feature: domain Description: PRK10276 Location: 75755-76163 bp Feature: domain Description: PRK102 76 Location: 75755-76163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CAAGZV010000002.1 (783208 bp)
Overview 1 RT 1: 507037-513890 bp Neighborhood of RT #1 [507037, 513907] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 507037-507702 bp Feature: domain Description: INT_P4_C Location: 507142-507700 bp Feature: domain Description: INT_P4_C Location: 507142-507700 bp Feature: gene Location: 507963-508403 bp Feature: domain Description: Integrase_1 Location: 507969-508185 bp Feature: domain Description: Integrase_1 Location: 507969-508185 bp Feature: gene Location: 508460-510538 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 508868-509312 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 508868-5093 12 bp Feature: gene Location: 510538-513147 bp Feature: domain Description: FimD Location: 510595-513136 bp Feature: domain Description: FimD Location: 510595-513 13 6 bp Feature: gene Location: 513179-513907 bp Feature: domain Description: FimC Location: 513212-513890 bp Feature: domain Description: FimC Location: 513 212-513 890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)