myRT

myRT report for GCA_900775955.1_27097_7_120-2

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Seq: CAAHAC010000026.1 (20427 bp)
Overview 1 RT 1: 3-3620 bp Neighborhood of RT #1 [3, 3622] RVT-GII PRK10276 umuC Feature: gene Location: 3-344 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1 464 bp Feature: gene Location: 1936-2355 bp Feature: domain Description: PRK10276 Location: 1939-2350 bp Feature: domain Description: PRK1 0276 Location: 1 939-2350 bp Feature: gene Location: 2357-3622 bp Feature: domain Description: umuC Location: 2360-3620 bp Feature: domain Description: umuC Location: 2360-3620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CAAHAC010000003.1 (490791 bp)
Overview 1 RT 1: 223-5995 bp Neighborhood of RT #1 [223, 5997] FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 223-2496 bp Feature: domain Description: FimD Location: 241-2485 bp Feature: domain Description: FimD Location: 2 41-2 485 bp Feature: gene Location: 2496-4574 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2904-3348 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 904-3348 bp Feature: gene Location: 4631-5071 bp Feature: domain Description: Integrase_1 Location: 4637-4853 bp Feature: domain Description: Integrase_1 Location: 4637-4853 bp Feature: gene Location: 5332-5997 bp Feature: domain Description: INT_P4_C Location: 5437-5995 bp Feature: domain Description: INT_P4_C Location: 5437-5995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)