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myRT report for GCA_900775965.1_27097_7_115-2
Download annotations/find similar RTs
Seq:
CAAHAD010000007.1 (372220 bp)
Overview
1
RT 1: 45429-52282 bp
Neighborhood of RT #1 [45429, 52299]
INT_P4_C
Integrase_1
RVT-UG4
FimD
FimC
Feature: gene
Location: 45429-46094 bp
Feature: domain
Description: INT_P4_C
Location: 45534-46092 bp
Feature: domain
Description: INT_P4_C
Location: 45534-46092 bp
Feature: gene
Location: 46355-46795 bp
Feature: domain
Description: Integrase_1
Location: 46361-46577 bp
Feature: domain
Description: Integrase_1
Location: 46361 -46577 bp
Feature: gene
Location: 46852-48930 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 47260-47704 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 47260-47704 bp
Feature: gene
Location: 48930-51539 bp
Feature: domain
Description: FimD
Location: 48987-51528 bp
Feature: domain
Description: FimD
Location: 48987-51 528 bp
Feature: gene
Location: 51571-52299 bp
Feature: domain
Description: FimC
Location: 51604-52282 bp
Feature: domain
Description: FimC
Location: 51 604-52282 bp
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Associated domains:
myRT
INT_P4_C (cd00801)
,
Integrase_1 (pfam12835)
,
RVT-UG4
,
FimD (COG3188)
,
FimC (COG3121)