myRT

myRT report for GCA_900775975.1_27097_7_121-2

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Seq: CAAHAH010000002.1 (770541 bp)
Overview 1 RT 1: 252266-258655 bp Neighborhood of RT #1 [252266, 258657] DDE_Tnp_IS1 FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 252266-252769 bp Feature: domain Description: DDE_Tnp_IS1 Location: 252377-252767 bp Feature: domain Description: DDE_Tnp_IS1 Location: 252377-252767 bp Feature: gene Location: 252883-255156 bp Feature: domain Description: FimD Location: 252901-255145 bp Feature: domain Description: FimD Location: 252901 -2551 45 bp Feature: gene Location: 255156-257234 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 255564-256008 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 255564-256008 bp Feature: gene Location: 257291-257731 bp Feature: domain Description: Integrase_1 Location: 257297-257513 bp Feature: domain Description: Integrase_1 Location: 257297-25751 3 bp Feature: gene Location: 257992-258657 bp Feature: domain Description: INT_P4_C Location: 258097-258655 bp Feature: domain Description: INT_P4_C Location: 258097-258655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: CAAHAH010000010.1 (159270 bp)
Overview 1 RT 1: 139374-143152 bp Neighborhood of RT #1 [139374, 143152] RVT-GII PRK10276 Feature: gene Location: 139374-139544 bp Feature: gene Location: 139878-140108 bp Feature: gene Location: 140342-141829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140747-141437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140747-141437 bp Feature: gene Location: 142232-142657 bp Feature: domain Description: PRK10276 Location: 142235-142643 bp Feature: domain Description: PRK102 76 Location: 142 2 35-142 643 bp Feature: gene Location: 143006-143152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)