myRT

myRT report for GCA_900776145.1_27097_7_135-2

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Seq: CAAHAT010000003.1 (384553 bp)
Overview 1 RT 1: 88069-94922 bp Neighborhood of RT #1 [88069, 94939] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 88069-88734 bp Feature: domain Description: INT_P4_C Location: 88174-88732 bp Feature: domain Description: INT_P4_C Location: 881 74-88732 bp Feature: gene Location: 88995-89435 bp Feature: domain Description: Integrase_1 Location: 89001-89217 bp Feature: domain Description: Integrase_1 Location: 89001 -8921 7 bp Feature: gene Location: 89492-91570 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 89900-90344 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 89900-90344 bp Feature: gene Location: 91570-94179 bp Feature: domain Description: FimD Location: 91627-94168 bp Feature: domain Description: FimD Location: 91 627-941 68 bp Feature: gene Location: 94211-94939 bp Feature: domain Description: FimC Location: 94259-94922 bp Feature: domain Description: FimC Location: 94259-94922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: CAAHAT010000018.1 (93266 bp)
Overview 1 RT 1: 11251-20959 bp Neighborhood of RT #1 [11251, 20979] AAA_13 AAA_13 COG0610 RVT-Retrons AAA_15 AAA_15 COG2958 Feature: gene Location: 11251-12429 bp Feature: domain Description: AAA_13 Location: 11344-11518 bp Feature: domain Description: AAA_13 Location: 11344-11518 bp Feature: domain Description: AAA_13 Location: 11740-12313 bp Feature: domain Description: AAA_13 Location: 11740-12 313 bp Feature: gene Location: 12422-15541 bp Feature: domain Description: COG0610 Location: 12506-15518 bp Feature: domain Description: COG0610 Location: 12 506-15518 bp Feature: gene Location: 16083-17183 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16224-16785 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162 2 4-16785 bp Feature: gene Location: 17356-19473 bp Feature: domain Description: AAA_15 Location: 17359-17776 bp Feature: domain Description: AAA_15 Location: 17359-17776 bp Feature: domain Description: AAA_15 Location: 17914-18340 bp Feature: domain Description: AAA_15 Location: 17914-18340 bp Feature: gene Location: 20047-20979 bp Feature: domain Description: COG2958 Location: 20065-20959 bp Feature: domain Description: COG2 958 Location: 2 0065-2 0959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, AAA_15 (pfam13175), COG2958 (Uncharacterized protein )