myRT

myRT report for GCA_900776355.1_27097_7_160-2

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Seq: CAAHBT010000007.1 (369321 bp)
Overview 1 RT 1: 366920-368871 bp Neighborhood of RT #1 [366920, 369263] DinI RVT-GII Feature: gene Location: 366920-367162 bp Feature: domain Description: DinI Location: 366971-367151 bp Feature: domain Description: DinI Location: 366971 -3671 51 bp Feature: gene Location: 367177-367323 bp Feature: gene Location: 367776-369263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368181-368871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3681 81 -368871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII

Seq: CAAHBT010000001.1 (985991 bp)
Overview 1 RT 1: 539840-546693 bp Neighborhood of RT #1 [539840, 546710] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 539840-540505 bp Feature: domain Description: INT_P4_C Location: 539945-540503 bp Feature: domain Description: INT_P4_C Location: 539945-540503 bp Feature: gene Location: 540766-541206 bp Feature: domain Description: Integrase_1 Location: 540772-540988 bp Feature: domain Description: Integrase_1 Location: 540772 -540988 bp Feature: gene Location: 541263-543341 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 541671-542115 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 541671-542 115 bp Feature: gene Location: 543341-545950 bp Feature: domain Description: FimD Location: 543398-545939 bp Feature: domain Description: FimD Location: 543398-545939 bp Feature: gene Location: 545982-546710 bp Feature: domain Description: FimC Location: 546015-546693 bp Feature: domain Description: FimC Location: 546015-546693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)