myRT

myRT report for GCA_900776455.1_27097_7_169-2

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Seq: CAAHCE010000024.1 (23244 bp)
Overview 1 RT 1: 12377-15647 bp Neighborhood of RT #1 [12377, 15661] RVT-GII PRK10276 Feature: gene Location: 12377-12592 bp Feature: gene Location: 12859-13089 bp Feature: gene Location: 13323-14834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13728-14442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3728-1 4442 bp Feature: gene Location: 14885-15118 bp Feature: gene Location: 15236-15661 bp Feature: domain Description: PRK10276 Location: 15239-15647 bp Feature: domain Description: PRK1 0276 Location: 1 5239-1 5647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CAAHCE010000007.1 (314809 bp)
Overview 1 RT 1: 51827-58680 bp Neighborhood of RT #1 [51827, 58697] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 51827-52492 bp Feature: domain Description: INT_P4_C Location: 51932-52490 bp Feature: domain Description: INT_P4_C Location: 51932 -52 490 bp Feature: gene Location: 52753-53193 bp Feature: domain Description: Integrase_1 Location: 52759-52975 bp Feature: domain Description: Integrase_1 Location: 52 759-52 975 bp Feature: gene Location: 53250-55328 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 53658-54102 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 53658-54102 bp Feature: gene Location: 55328-57937 bp Feature: domain Description: FimD Location: 55385-57926 bp Feature: domain Description: FimD Location: 55385-5792 6 bp Feature: gene Location: 57969-58697 bp Feature: domain Description: FimC Location: 58002-58680 bp Feature: domain Description: FimC Location: 58002 -58680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)