myRT

myRT report for GCA_900776515.1_27097_7_176-2

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Seq: CAAHCK010000007.1 (250435 bp)
Overview 1 RT 1: 92985-98912 bp Neighborhood of RT #1 [92985, 98929] Integrase_1 Fimbrial RVT-UG4 FimD FimC Feature: gene Location: 92985-93425 bp Feature: domain Description: Integrase_1 Location: 92991-93207 bp Feature: domain Description: Integrase_1 Location: 92991 -93207 bp Feature: gene Location: 93482-94093 bp Feature: domain Description: Fimbrial Location: 93632-94082 bp Feature: domain Description: Fimbrial Location: 93632-94082 bp Feature: gene Location: 94169-95560 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 94577-95021 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 94577-95021 bp Feature: gene Location: 95560-98169 bp Feature: domain Description: FimD Location: 95617-98158 bp Feature: domain Description: FimD Location: 9561 7-981 58 bp Feature: gene Location: 98201-98929 bp Feature: domain Description: FimC Location: 98249-98912 bp Feature: domain Description: FimC Location: 98249-9891 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), Fimbrial (pfam00419), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: CAAHCK010000025.1 (36592 bp)
Overview 1 RT 1: 26105-31127 bp Neighborhood of RT #1 [26105, 31135] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 26105-27070 bp Feature: domain Description: ArdC Location: 26231-27065 bp Feature: domain Description: ArdC Location: 2 62 31-2 7065 bp Feature: gene Location: 27202-27390 bp Feature: gene Location: 27540-29027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27945-28635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7945-2 8635 bp Feature: gene Location: 29181-29864 bp Feature: domain Description: PRK10276 Location: 29484-29847 bp Feature: domain Description: PRK102 76 Location: 2 9484-2 9847 bp Feature: gene Location: 29864-31135 bp Feature: domain Description: umuC Location: 29867-31127 bp Feature: domain Description: umuC Location: 2 9867-3112 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)