myRT

myRT report for GCA_900977905.1_04A025.1

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Seq: CAAHFZ010000054.1 (34039 bp)
Overview 1 RT 1: 4647-7917 bp Neighborhood of RT #1 [4647, 7931] RVT-GII PRK10276 Feature: gene Location: 4647-4862 bp Feature: gene Location: 5129-5359 bp Feature: gene Location: 5593-7104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5998-6712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5998-671 2 bp Feature: gene Location: 7155-7388 bp Feature: gene Location: 7506-7931 bp Feature: domain Description: PRK10276 Location: 7509-7917 bp Feature: domain Description: PRK1 0276 Location: 7509-791 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CAAHFZ010000043.1 (220320 bp)
Overview 1 RT 1: 32100-38953 bp Neighborhood of RT #1 [32100, 38970] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32100-32765 bp Feature: domain Description: INT_P4_C Location: 32205-32763 bp Feature: domain Description: INT_P4_C Location: 32 2 05-32 763 bp Feature: gene Location: 33026-33466 bp Feature: domain Description: Integrase_1 Location: 33032-33248 bp Feature: domain Description: Integrase_1 Location: 33032 -332 48 bp Feature: gene Location: 33523-35601 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33931-34375 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33931-34375 bp Feature: gene Location: 35601-38210 bp Feature: domain Description: FimD Location: 35658-38199 bp Feature: domain Description: FimD Location: 35658-38199 bp Feature: gene Location: 38242-38970 bp Feature: domain Description: FimC Location: 38290-38953 bp Feature: domain Description: FimC Location: 382 90-38953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)