myRT

myRT report for GCA_900996235.1_ASM90099623v1

Download annotations/find similar RTs

Seq: CAAJGM010000199.1 (92414 bp)
Overview 1 RT 1: 1481-5507 bp Neighborhood of RT #1 [1481, 5602] Hit RVT-GII NT_KNTase_like Acetyltransf_3 Feature: gene Location: 1481-1897 bp Feature: domain Description: Hit Location: 1490-1871 bp Feature: domain Description: Hit Location: 1 490-1 871 bp Feature: gene Location: 1959-2201 bp Feature: gene Location: 2281-3774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2692-3379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2692-3379 bp Feature: gene Location: 3771-4487 bp Feature: domain Description: NT_KNTase_like Location: 3786-3996 bp Feature: domain Description: NT_KNTase_like Location: 3786-3996 bp Feature: gene Location: 5060-5602 bp Feature: domain Description: Acetyltransf_3 Location: 5102-5507 bp Feature: domain Description: Acetyltransf_3 Location: 51 02-5507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hit (COG0537), RVT-GII, NT_KNTase_like (cd05403), Acetyltransf_3 (pfam13302)

Seq: CAAJGM010000270.1 (2857 bp)
Overview 1 RT 1: 72-2574 bp Neighborhood of RT #1 [72, 2606] RVT-GII CBS_pair_BON_assoc BON Feature: gene Location: 72-368 bp Feature: gene Location: 453-1706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657-1350 bp Feature: gene Location: 1917-2606 bp Feature: domain Description: CBS_pair_BON_assoc Location: 1938-2343 bp Feature: domain Description: CBS_pair_BON_assoc Location: 1938-2 343 bp Feature: domain Description: BON Location: 2388-2574 bp Feature: domain Description: BON Location: 2 388-2 574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, CBS_pair_BON_assoc (cd04586), BON (smart00749)

Seq: CAAJGM010000208.1 (807595 bp)
Overview 1 RT 1: 619316-627326 bp Neighborhood of RT #1 [619316, 627436] PRK05711 RVT-Retrons Cls MdlB Feature: gene Location: 619316-620050 bp Feature: domain Description: PRK05711 Location: 619319-620015 bp Feature: domain Description: PRK05711 Location: 6193 19-620015 bp Feature: gene Location: 620341-620505 bp Feature: gene Location: 621958-622974 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 622108-622672 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 622108-622672 bp Feature: gene Location: 623621-625045 bp Feature: domain Description: Cls Location: 623732-624875 bp Feature: domain Description: Cls Location: 623 73 2-624875 bp Feature: gene Location: 625550-627436 bp Feature: domain Description: MdlB Location: 625598-627326 bp Feature: domain Description: MdlB Location: 625598-6273 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05711 (DNA polymerase III subunit epsilon; Provisional), RVT-Retrons, Cls (COG1502), MdlB (COG1132)

Seq: CAAJGM010000243.1 (15595 bp)
Overview 1 RT 1: 10894-15508 bp Neighborhood of RT #1 [10894, 15594] Phage_int_SAM_4 INT_IntI_C RVT-GII GIIM Phage_int_SAM_1 INT_RitA_C_like INT_RitC_C_like Feature: gene Location: 10894-11772 bp Feature: domain Description: Phage_int_SAM_4 Location: 10906-11152 bp Feature: domain Description: Phage_int_SAM_4 Location: 10906-11152 bp Feature: domain Description: INT_IntI_C Location: 11188-11677 bp Feature: domain Description: INT_IntI_C Location: 11188-11677 bp Feature: gene Location: 11738-11968 bp Feature: gene Location: 12380-13717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12731-13352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12731-13352 bp Feature: domain Description: GIIM Note: maturase Location: 13403-13616 bp Feature: domain Description: GIIM Note: maturase Location: 134 03-13616 bp Feature: gene Location: 14066-15109 bp Feature: domain Description: Phage_int_SAM_1 Location: 14321-14534 bp Feature: domain Description: Phage_int_SAM_1 Location: 14 321-14 534 bp Feature: domain Description: INT_RitA_C_like Location: 14615-15104 bp Feature: domain Description: INT_RitA_C_like Location: 14 615-15104 bp Feature: gene Location: 15193-15594 bp Feature: domain Description: INT_RitC_C_like Location: 15325-15508 bp Feature: domain Description: INT_RitC_C_like Location: 15325-15508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitC_C_like (cd01182)