myRT

myRT report for GCA_901212435.1_NZ_Bacteroides_ovatus_MC1

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Seq: CAAKNR010000079.1 (79702 bp)
Overview 1 RT 1: 43047-55471 bp Neighborhood of RT #1 [43047, 55587] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 43047-43520 bp Feature: gene Location: 44186-46393 bp Feature: gene Location: 46599-47729 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46920-47463 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46920-47463 bp Feature: gene Location: 47731-53688 bp Feature: domain Description: DUF4011 Location: 48961-49474 bp Feature: domain Description: DUF401 1 Location: 48961 -49474 bp Feature: domain Description: DEXXQc_SF1 Location: 49813-50779 bp Feature: domain Description: DEXXQc_SF1 Location: 4981 3-50779 bp Feature: domain Description: DEXXQc_SF1 Location: 51241-52000 bp Feature: domain Description: DEXXQc_SF1 Location: 51 241 -52000 bp Feature: domain Description: TIGR00376 Location: 52129-52519 bp Feature: domain Description: TIGR00376 Location: 521 29-5251 9 bp Feature: domain Description: MTES_1575 Location: 52672-52957 bp Feature: domain Description: MTES_1 575 Location: 52672-52957 bp Feature: domain Description: DUF3320 Location: 53197-53335 bp Feature: domain Description: DUF3320 Location: 531 97-53335 bp Feature: gene Location: 53785-55587 bp Feature: domain Description: rpsA Location: 53854-55471 bp Feature: domain Description: rpsA Location: 53854-55471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNR010000013.1 (160748 bp)
Overview 1 RT 1: 38977-42426 bp Neighborhood of RT #1 [38977, 43241] RVT-DGRs Phage_Mu_F Feature: gene Location: 38977-39420 bp Feature: gene Location: 39493-39975 bp Feature: gene Location: 39975-41276 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40188-40782 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40188-40782 bp Feature: gene Location: 41427-41651 bp Feature: gene Location: 41790-43241 bp Feature: domain Description: Phage_Mu_F Location: 42150-42426 bp Feature: domain Description: Phage_Mu_F Location: 42 150-42 42 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNR010000222.1 (88043 bp)
Overview 1 RT 1: 3403-6906 bp Neighborhood of RT #1 [3403, 6935] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 3403-3696 bp Feature: gene Location: 3895-4173 bp Feature: gene Location: 4136-5557 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4511-5213 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4511-5213 bp Feature: gene Location: 5572-5979 bp Feature: domain Description: Avd_like Location: 5605-5914 bp Feature: domain Description: Avd_like Location: 5605-5914 bp Feature: gene Location: 6126-6935 bp Feature: domain Description: DUF1566 Location: 6657-6906 bp Feature: domain Description: DUF1566 Location: 6657-6906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNR010000180.1 (147332 bp)
Overview 1 RT 1: 116956-123317 bp Neighborhood of RT #1 [116956, 123364] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 Feature: gene Location: 116956-118005 bp Feature: gene Location: 118024-118152 bp Feature: gene Location: 118247-120070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118511-119333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118511-119333 bp Feature: domain Description: Intron_maturas2 Location: 119507-119759 bp Feature: domain Description: Intron_maturas2 Location: 119507-119759 bp Feature: domain Description: HNHc Note: nucleases Location: 119861-120032 bp Feature: domain Description: HNHc Note: nucleases Location: 119861-120032 bp Feature: gene Location: 120639-123035 bp Feature: domain Description: Bac_Flav_CT_G Location: 120642-123024 bp Feature: domain Description: Bac_Flav_CT_G Location: 12064 2-123024 bp Feature: gene Location: 123032-123364 bp Feature: domain Description: DUF4133 Location: 123050-123317 bp Feature: domain Description: DUF4 133 Location: 123050-123317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNR010000172.1 (42887 bp)
Overview 1 RT 1: 39269-40691 bp Neighborhood of RT #1 [39269, 40691] RVT-GII HTH_28 Feature: gene Location: 39269-39631 bp Feature: gene Location: 39635-39844 bp Feature: gene Location: 39874-40071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39877-40069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39877-40069 bp Feature: gene Location: 40192-40482 bp Feature: domain Description: HTH_28 Location: 40216-40363 bp Feature: domain Description: HTH_28 Location: 40216-40363 bp Feature: gene Location: 40557-40691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNR010000216.1 (1502 bp)
Overview 1 RT 1: 3-1501 bp Neighborhood of RT #1 [3, 1501] RVT-GII GIIM Feature: gene Location: 3-1361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51-699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51-6 99 bp Feature: domain Description: GIIM Note: maturase Location: 756-987 bp Feature: domain Description: GIIM Note: maturase Location: 756 -987 bp Feature: gene Location: 1358-1501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNR010000187.1 (48210 bp)
Overview 1 RT 1: 42763-47199 bp Neighborhood of RT #1 [42763, 47237] Relaxase RVT-GII Intron_maturas2 HNHc Relaxase MobC Feature: gene Location: 42763-43482 bp Feature: gene Location: 43487-44077 bp Feature: domain Description: Relaxase Location: 43490-43871 bp Feature: domain Description: Relaxase Location: 43490-4387 1 bp Feature: gene Location: 44189-45994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44453-45275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44453-4527 5 bp Feature: domain Description: Intron_maturas2 Location: 45353-45659 bp Feature: domain Description: Intron_maturas2 Location: 45353-45659 bp Feature: domain Description: HNHc Note: nucleases Location: 45821-45965 bp Feature: domain Description: HNHc Note: nucleases Location: 45821-45965 bp Feature: gene Location: 46547-46888 bp Feature: domain Description: Relaxase Location: 46574-46880 bp Feature: domain Description: Relaxase Location: 4657 4-46880 bp Feature: gene Location: 46854-47237 bp Feature: domain Description: MobC Location: 47070-47199 bp Feature: domain Description: MobC Location: 47 07 0-47 199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNR010000196.1 (2485 bp)
Overview 1 RT 1: 115-2355 bp Neighborhood of RT #1 [115, 2355] RVT-GII Intron_maturas2 Feature: gene Location: 115-1923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1201 bp Feature: domain Description: Intron_maturas2 Location: 1270-1579 bp Feature: domain Description: Intron_maturas2 Location: 1270-1579 bp Feature: gene Location: 2212-2355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNR010000158.1 (51640 bp)
Overview 1 RT 1: 34254-39622 bp Neighborhood of RT #1 [34254, 40791] Abhydrolase_7 GIIM RVT-GII RVT-GII Mfa_like_1 Feature: gene Location: 34254-35498 bp Feature: domain Description: Abhydrolase_7 Location: 34335-35487 bp Feature: domain Description: Abhydrolase_7 Location: 34335-35487 bp Feature: gene Location: 35688-36038 bp Feature: domain Description: GIIM Note: maturase Location: 35775-35925 bp Feature: domain Description: GIIM Note: maturase Location: 35775-359 25 bp Feature: gene Location: 36176-36976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36389-36971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36389 -369 71 bp Feature: gene Location: 37698-38009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37701-37965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37701-379 65 bp Feature: gene Location: 38130-38294 bp Feature: gene Location: 38749-40791 bp Feature: domain Description: Mfa_like_1 Location: 38908-39622 bp Feature: domain Description: Mfa_like_1 Location: 389 08-39 622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT