myRT

myRT report for GCA_901212445.1_NZ_Bacteroides_fragilis_MC1

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Seq: CAAKNW010000097.1 (24657 bp)
Overview 1 RT 1: 11966-18332 bp Neighborhood of RT #1 [11966, 18361] Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C RteC Feature: gene Location: 11966-13216 bp Feature: domain Description: Relaxase Location: 12020-12521 bp Feature: domain Description: Relaxase Location: 1 2020-1 2521 bp Feature: gene Location: 13249-14175 bp Feature: domain Description: YWFCY Location: 13258-13435 bp Feature: domain Description: YWFCY Location: 1 3258-1 3435 bp Feature: gene Location: 14812-16464 bp Feature: domain Description: RVT_N Location: 14866-15109 bp Feature: domain Description: RVT_N Location: 1 4866-1 51 09 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15154-15802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 54-1 5802 bp Feature: domain Description: GIIM Note: maturase Location: 15856-16087 bp Feature: domain Description: GIIM Note: maturase Location: 1 5856-1 6087 bp Feature: gene Location: 16469-17674 bp Feature: domain Description: TraG-D_C Location: 17051-17381 bp Feature: domain Description: TraG-D_C Location: 1 7051 -1 7381 bp Feature: gene Location: 17756-18361 bp Feature: domain Description: RteC Location: 18059-18332 bp Feature: domain Description: RteC Location: 1 8059-1 8332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNW010000063.1 (46923 bp)
Overview 1 RT 1: 35083-36505 bp Neighborhood of RT #1 [35083, 36505] HTH_28 RVT-GII Feature: gene Location: 35083-35217 bp Feature: gene Location: 35292-35582 bp Feature: domain Description: HTH_28 Location: 35316-35463 bp Feature: domain Description: HTH_2 8 Location: 35316-35463 bp Feature: gene Location: 35703-35900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35706-35898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35706-35898 bp Feature: gene Location: 35930-36139 bp Feature: gene Location: 36143-36505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNW010000142.1 (52501 bp)
Overview 1 RT 1: 2894-9392 bp Neighborhood of RT #1 [2894, 9676] DUF2971 COG3943 RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like GT_2_like_e Feature: gene Location: 2894-3940 bp Feature: domain Description: DUF2971 Location: 3476-3731 bp Feature: domain Description: DUF2971 Location: 3 476-3 73 1 bp Feature: gene Location: 4048-4410 bp Feature: domain Description: COG3943 Location: 4087-4339 bp Feature: domain Description: COG3 943 Location: 4087-43 3 9 bp Feature: gene Location: 4625-6433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4889-5711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4889-5711 bp Feature: domain Description: Intron_maturas2 Location: 5822-6092 bp Feature: domain Description: Intron_maturas2 Location: 5822-6092 bp Feature: gene Location: 6980-8149 bp Feature: domain Description: Arm-DNA-bind_5 Location: 7010-7265 bp Feature: domain Description: Arm-DNA-bind_5 Location: 7010-7265 bp Feature: domain Description: Phage_int_SAM_5 Location: 7304-7625 bp Feature: domain Description: Phage_int_SAM_5 Location: 73 04-7625 bp Feature: domain Description: INTN1_C_like Location: 7664-8132 bp Feature: domain Description: INTN1_C_like Location: 7664-813 2 bp Feature: gene Location: 8504-9676 bp Feature: domain Description: GT_2_like_e Location: 8678-9392 bp Feature: domain Description: GT_2_like_e Location: 8678-93 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAKNW010000019.1 (142862 bp)
Overview 1 RT 1: 62551-71516 bp Neighborhood of RT #1 [62551, 71518] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 62551-63465 bp Feature: domain Description: RNase_Z Location: 62566-63457 bp Feature: domain Description: RNase_Z Location: 62566-634 57 bp Feature: gene Location: 63615-65408 bp Feature: domain Description: rpsA Location: 63693-65301 bp Feature: domain Description: rpsA Location: 63693-65301 bp Feature: gene Location: 65550-66662 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65865-66414 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65865-664 14 bp Feature: gene Location: 66869-69088 bp Feature: gene Location: 69329-71518 bp Feature: domain Description: GlnA3 Location: 69404-71516 bp Feature: domain Description: GlnA3 Location: 694 04 -71516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT