myRT

myRT report for GCA_901420825.1_39641_E02

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Seq: CABDWH010000003.1 (5133337 bp)
Overview 1 RT 1: 720526-726635 bp 2 RT 2: 1168755-1175467 bp Neighborhood of RT #1 [720526, 726637] FimD FimD RVT-UG4 Integrase_1 INT_P4_C Neighborhood of RT #2 [1168755, 1175467] HTH_XRE RVT-Retrons IS5 Feature: gene Location: 720526-722589 bp Feature: domain Description: FimD Location: 720583-722575 bp Feature: domain Description: FimD Location: 720583-722575 bp Feature: gene Location: 722615-723136 bp Feature: domain Description: FimD Location: 722618-723125 bp Feature: domain Description: FimD Location: 72261 8-7231 25 bp Feature: gene Location: 723136-725214 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 723544-723988 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 723544-723988 bp Feature: gene Location: 725271-725711 bp Feature: domain Description: Integrase_1 Location: 725277-725493 bp Feature: domain Description: Integrase_1 Location: 725277-725493 bp Feature: gene Location: 725972-726637 bp Feature: domain Description: INT_P4_C Location: 726077-726635 bp Feature: domain Description: INT_P4_C Location: 726077-726635 bp Feature: gene Location: 1168755-1169081 bp Feature: gene Location: 1169133-1169423 bp Feature: domain Description: HTH_XRE Location: 1169145-1169310 bp Feature: domain Description: HTH_XRE Location: 1 1 691 45-1 1 6931 0 bp Feature: gene Location: 1169458-1170375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1169554-1170121 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 69554-1 1 701 21 bp Feature: gene Location: 1170542-1171522 bp Feature: domain Description: IS5 Location: 1170731-1171508 bp Feature: domain Description: IS5 Location: 1 1 70731 -1 1 71 508 bp Feature: gene Location: 1171865-1175467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801), HTH_XRE (smart00530), RVT-Retrons, IS5 (COG3039)