myRT

myRT report for GCA_901456255.1_32_P_CF_hybrid_assembly

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Seq: CABDXC010000001.1 (5038088 bp)
Overview 1 RT 1: 653085-657168 bp 2 RT 2: 3906095-3909854 bp 3 RT 3: 3939826-3942553 bp Neighborhood of RT #1 [653085, 657233] COG3547 PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [3906095, 3909862] HTH_38 Tra8 RVT-GII GIIM HTH_Tnp_Mu_1 SfsB Neighborhood of RT #3 [3939826, 3942618] PinE RVT-GII PHA02517 Feature: gene Location: 653085-654167 bp Feature: domain Description: COG3547 Location: 653130-654093 bp Feature: domain Description: COG3547 Location: 6531 30-654093 bp Feature: gene Location: 654373-654585 bp Feature: domain Description: PHA02517 Location: 654376-654532 bp Feature: domain Description: PHA0251 7 Location: 654376-654532 bp Feature: gene Location: 654708-656231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654981-655713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654981 -65571 3 bp Feature: domain Description: GIIM Note: maturase Location: 655788-655986 bp Feature: domain Description: GIIM Note: maturase Location: 655788-655986 bp Feature: gene Location: 656185-656610 bp Feature: gene Location: 656823-657233 bp Feature: domain Description: PHA02517 Location: 656829-657168 bp Feature: domain Description: PHA0251 7 Location: 656829-6571 68 bp Feature: gene Location: 3906095-3907246 bp Feature: domain Description: HTH_38 Location: 3906104-3906218 bp Feature: domain Description: HTH_38 Location: 39061 04-390621 8 bp Feature: domain Description: Tra8 Location: 3906254-3907235 bp Feature: domain Description: Tra8 Location: 3906254-3907235 bp Feature: gene Location: 3907562-3907741 bp Feature: gene Location: 3907854-3908681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908079-3908163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908079-39081 63 bp Feature: domain Description: GIIM Note: maturase Location: 3908238-3908457 bp Feature: domain Description: GIIM Note: maturase Location: 3908238-3908457 bp Feature: gene Location: 3908919-3909410 bp Feature: domain Description: HTH_Tnp_Mu_1 Location: 3908961-3909303 bp Feature: domain Description: HTH_Tnp_Mu_1 Location: 3908961 -3909303 bp Feature: gene Location: 3909608-3909862 bp Feature: domain Description: SfsB Location: 3909647-3909854 bp Feature: domain Description: SfsB Location: 3909647-3909854 bp Feature: gene Location: 3939826-3940206 bp Feature: gene Location: 3940236-3940790 bp Feature: domain Description: PinE Location: 3940239-3940779 bp Feature: domain Description: PinE Location: 3940239-3940779 bp Feature: gene Location: 3940798-3941601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3941071-3941563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3941 071 -3941 563 bp Feature: gene Location: 3941555-3941980 bp Feature: gene Location: 3942193-3942618 bp Feature: domain Description: PHA02517 Location: 3942217-3942553 bp Feature: domain Description: PHA0251 7 Location: 394221 7-3942553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826), HTH_Tnp_Mu_1 (pfam02316), SfsB (COG3423), PinE (COG1961)