myRT

myRT report for GCA_901482375.1_43295_G02

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Seq: CABEEI010000004.1 (1059753 bp)
Overview 1 RT 1: 48948-54760 bp Neighborhood of RT #1 [48948, 54760] PRK06213 RVT-GII GIIM TonB-siderophor Feature: gene Location: 48948-49637 bp Feature: domain Description: PRK06213 Location: 48951-49632 bp Feature: domain Description: PRK0621 3 Location: 48951 -49632 bp Feature: gene Location: 50079-50249 bp Feature: gene Location: 50399-51820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50756-51371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50756-51 371 bp Feature: domain Description: GIIM Note: maturase Location: 51425-51653 bp Feature: domain Description: GIIM Note: maturase Location: 51 425-51 653 bp Feature: gene Location: 52047-54179 bp Feature: domain Description: TonB-siderophor Location: 52236-54177 bp Feature: domain Description: TonB-siderophor Location: 52236-541 77 bp Feature: gene Location: 54380-54760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABEEI010000013.1 (769863 bp)
Overview 1 RT 1: 232856-236925 bp 2 RT 2: 277879-283394 bp Neighborhood of RT #1 [232856, 236957] COG4386 RVT-GII GIIM Tail_tube Phage_TAC_7 Neighborhood of RT #2 [277879, 283402] galU RVT-GII GIIM PRK06116 PBP2_phosphate_like_1 OmpA_C-like Feature: gene Location: 232856-234343 bp Feature: domain Description: COG4386 Location: 232859-234317 bp Feature: domain Description: COG4386 Location: 2 32 859-2 34317 bp Feature: gene Location: 234493-234663 bp Feature: gene Location: 234813-236234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235170-235785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 35170-2 35785 bp Feature: domain Description: GIIM Note: maturase Location: 235839-236067 bp Feature: domain Description: GIIM Note: maturase Location: 2 35839-2 36067 bp Feature: gene Location: 236317-236664 bp Feature: domain Description: Tail_tube Location: 236326-236656 bp Feature: domain Description: Tail_tube Location: 2 3632 6-2 36656 bp Feature: gene Location: 236661-236957 bp Feature: domain Description: Phage_TAC_7 Location: 236676-236925 bp Feature: domain Description: Phage_TAC_7 Location: 2 36676-2 3692 5 bp Feature: gene Location: 277879-278718 bp Feature: domain Description: galU Location: 277888-278671 bp Feature: domain Description: galU Location: 2 77888-2 78671 bp Feature: gene Location: 278872-279042 bp Feature: gene Location: 279192-280613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279549-280164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 79549-2 80164 bp Feature: domain Description: GIIM Note: maturase Location: 280218-280446 bp Feature: domain Description: GIIM Note: maturase Location: 2 802 18-2 80446 bp Feature: gene Location: 280736-282091 bp Feature: domain Description: PRK06116 Location: 280739-282077 bp Feature: domain Description: PRK06116 Location: 2 80739-2 82 077 bp Feature: gene Location: 282095-283402 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 282164-282986 bp Feature: domain Description: PBP2 _phosphate_like_1 Location: 2 82 164-2 82 986 bp Feature: domain Description: OmpA_C-like Location: 283085-283394 bp Feature: domain Description: OmpA_C-like Location: 2 83085-2 83394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABEEI010000015.1 (1379703 bp)
Overview 1 RT 1: 144387-151972 bp 2 RT 2: 832447-838094 bp Neighborhood of RT #1 [144387, 151992] OYE_YqiM_FMN HTH_20 RVT-GII GIIM PRK05257 RVT-GII GIIM DUF4223 Neighborhood of RT #2 [832447, 838102] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C CSP_CDS RVT-GII GIIM N_methyl Pilin Feature: gene Location: 144387-145496 bp Feature: domain Description: OYE_YqiM_FMN Location: 144417-145428 bp Feature: domain Description: OYE_YqiM_FMN Location: 144417-145428 bp Feature: gene Location: 145564-145863 bp Feature: domain Description: HTH_20 Location: 145612-145780 bp Feature: domain Description: HTH_20 Location: 145612-145780 bp Feature: gene Location: 146015-147436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146372-146987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463 72-146987 bp Feature: domain Description: GIIM Note: maturase Location: 147041-147269 bp Feature: domain Description: GIIM Note: maturase Location: 147041-147269 bp Feature: gene Location: 147586-147756 bp Feature: gene Location: 147916-149553 bp Feature: domain Description: PRK05257 Location: 147991-149461 bp Feature: domain Description: PRK05257 Location: 147991-149461 bp Feature: gene Location: 149875-151296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150232-150847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15023 2-150847 bp Feature: domain Description: GIIM Note: maturase Location: 150901-151129 bp Feature: domain Description: GIIM Note: maturase Location: 150901-151129 bp Feature: gene Location: 151446-151616 bp Feature: gene Location: 151801-151992 bp Feature: domain Description: DUF4223 Location: 151804-151972 bp Feature: domain Description: DUF4223 Location: 151804-151972 bp Feature: gene Location: 832447-833979 bp Feature: domain Description: LZ_Tnp_IS66 Location: 832555-832765 bp Feature: domain Description: LZ_Tnp_IS66 Location: 83 2555-83 2765 bp Feature: domain Description: zf-IS66 Location: 832795-832918 bp Feature: domain Description: zf-IS66 Location: 83 2795-83 2918 bp Feature: domain Description: DDE_Tnp_IS66 Location: 832963-833818 bp Feature: domain Description: DDE_Tnp_IS66 Location: 83 2963 -83 3 818 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 833839-833953 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 83 3 83 9-83 3 953 bp Feature: gene Location: 834610-835350 bp Feature: domain Description: CSP_CDS Location: 834649-834823 bp Feature: domain Description: CSP_CDS Location: 83 4649-83 4823 bp Feature: gene Location: 835624-837045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835981-836596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 5981-83 6596 bp Feature: domain Description: GIIM Note: maturase Location: 836650-836878 bp Feature: domain Description: GIIM Note: maturase Location: 83 6650-83 6878 bp Feature: gene Location: 837195-837365 bp Feature: gene Location: 837692-838102 bp Feature: domain Description: N_methyl Location: 837695-837773 bp Feature: domain Description: N_methyl Location: 83 7695-83 7773 bp Feature: domain Description: Pilin Location: 837797-838094 bp Feature: domain Description: Pilin Location: 83 7797-83 8094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABEEI010000010.1 (246284 bp)
Overview 1 RT 1: 237634-244120 bp Neighborhood of RT #1 [237634, 244131] PRK05657 RVT-GII GIIM PreA DUF3470 mutS1 Feature: gene Location: 237634-238641 bp Feature: domain Description: PRK05657 Location: 237694-238636 bp Feature: domain Description: PRK05657 Location: 237694 -238636 bp Feature: gene Location: 238796-238966 bp Feature: gene Location: 239116-240537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239473-240088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2394 73-24 0088 bp Feature: domain Description: GIIM Note: maturase Location: 240142-240370 bp Feature: domain Description: GIIM Note: maturase Location: 24 014 2-24 0370 bp Feature: gene Location: 241094-241417 bp Feature: domain Description: PreA Location: 241106-241280 bp Feature: domain Description: PreA Location: 24 1106-24 1280 bp Feature: domain Description: DUF3470 Location: 241292-241415 bp Feature: domain Description: DUF34 70 Location: 24 1292-24 14 15 bp Feature: gene Location: 241558-244131 bp Feature: domain Description: mutS1 Location: 241579-244120 bp Feature: domain Description: mutS1 Location: 24 1579-24 4 120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABEEI010000005.1 (289246 bp)
Overview 1 RT 1: 261517-266543 bp Neighborhood of RT #1 [261517, 266569] PRK10605 RVT-GII GIIM oxido_grp_1 LysR Feature: gene Location: 261517-262614 bp Feature: domain Description: PRK10605 Location: 261523-262603 bp Feature: domain Description: PRK10605 Location: 2615 23-262603 bp Feature: gene Location: 262760-262930 bp Feature: gene Location: 263080-264501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263437-264052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263437-26405 2 bp Feature: domain Description: GIIM Note: maturase Location: 264106-264334 bp Feature: domain Description: GIIM Note: maturase Location: 264106-264334 bp Feature: gene Location: 264577-265650 bp Feature: domain Description: oxido_grp_1 Location: 264682-265633 bp Feature: domain Description: oxido_grp_1 Location: 264682-265 633 bp Feature: gene Location: 265658-266569 bp Feature: domain Description: LysR Location: 265682-266543 bp Feature: domain Description: LysR Location: 265 682-2665 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT